Brettanomyces nanus: FOA43_003918
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Entry
FOA43_003918 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
bnn
Brettanomyces nanus
Pathway
bnn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FOA43_003918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bnn03009
]
FOA43_003918
Ribosome biogenesis [BR:
bnn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
FOA43_003918
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp12
EDC4_C
Motif
Other DBs
NCBI-GeneID:
62197318
NCBI-ProteinID:
XP_038780094
UniProt:
A0A875SAB6
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All DBs
Position
4:complement(1473431..1475368)
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AA seq
645 aa
AA seq
DB search
MSSLITSCFDATGRHVAYIVQTLDTETLKVQSIGGEESDHTVTVHPFDKKKNPRVKSLLW
LSSDTLGVIFRGSNKFILLNILSNEVTSTLKTDQLISSLTVSKSSHGKIYVVDSNSDLLE
YQLEADFSGWKLDKSYRLDDVELRTVHRLLDLNERYLFLFSNSVYLFDKKEGKVTDFKNL
YVSPINCAVECVSNNSVIVSADNDRFINLISVSEDGKIVIGEQILVAEGPVIEVTHYQIE
EFNLELVVALTEGRILEIFNDPFTKRAQSNTSDKKKRRKGPAVQSQRSDCKVELARKGTN
ESMSIEDITIDPRYLTIVWMEDSSYLAFDRIEWWQHPNDGEYRYRIVRDTKLIKDRPMVN
LGQNKDKHGDDRASAKHYKESNAIVSSGDNFRDLETNSENREEEELEDEDFGHLAEKFNI
DNKKRSTNGKKGKLQVGSLTVVLSQALKSNDHGLFESVLNNNRDENVIRNTVARLDTTYV
LALLDRLSERLGRGKGARNRQIQQQLDTWVKYILIYHGSYLISLPNLAADLNLLSNSLRI
RARNLNRLLDLRAKIGLVTDRMEMKRELGKQLVVDRSEEVDGEEENVEYNEEVDDAGLEE
DDVDDDDDYGGSNDNEMDVDSNEVYVGGEQGSDDEQYSDVEGDAS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattaattacatcgtgttttgatgcaacaggaagacatgttgcatatattgtt
cagacattggacactgagaccttgaaggtccaatccattggaggagaggaatctgaccat
acagtaacagttcatccatttgacaaaaagaagaatcctagggtaaaatcattattatgg
ctatcatcagatactttaggagtgatttttaggggttccaataaattcatactattgaac
atcctcagtaatgaggtgacaagtaccctaaagacagaccaactcatatccagtctcaca
gtcagcaaatctagccacggaaagatatatgtggttgattccaatagcgacctattagag
tatcaattagaagccgattttagtgggtggaaacttgacaaatcttacagacttgatgat
gttgagttacggacggtgcaccgactactggatctaaatgagagatatctatttctattc
tcaaactcggtttatttgtttgataagaaggagggtaaggtgactgactttaaaaattta
tatgtgagtccgatcaactgtgcagtggagtgtgtttcgaacaattcagtgattgtgtct
gctgataacgataggttcattaacttgataagtgtttccgaagatggcaagattgtcatt
ggagaacagatattagttgcagaaggtcctgtcattgaagtgactcattaccagattgag
gaattcaacttggaactggtagttgctttaactgagggaagaattctcgagatatttaat
gatccatttacaaagagagctcagagtaacacaagtgacaagaagaaaaggaggaaaggg
cccgctgtccagtctcaaagatctgattgtaaggtggaactagctcgaaagggtaccaac
gagtctatgtcaattgaggatatcactatagatcccagatatctgactatagtttggatg
gaagactccagttatctcgcattcgatcgtattgaatggtggcagcacccgaatgatgga
gaatatagatatcggattgtgagagataccaagttaataaaggatagaccaatggtgaac
ctcggtcagaacaaggacaaacatggtgatgatcgtgccagtgccaagcattacaaagag
agtaacgctattgtttcgtccggagacaattttagagatttggaaacaaactcagaaaat
cgtgaggaagaggaactggaggatgaagactttggtcacttggctgaaaagtttaatata
gataacaagaaaaggagcactaatgggaagaagggaaaattacaggttggatcattgact
gttgttttatcgcaggcattgaaatcgaatgatcacggattgtttgaaagtgtgttgaac
aataaccgagatgagaatgttattaggaacactgtggccagattggatactacgtatgtt
ttggctttattggacagactcagcgagaggttaggcaggggtaaaggagcaagaaataga
caaatacagcaacagcttgacacttgggtaaagtacatactgatctatcatggatcgtat
ttgattagtttacctaacttggcagccgatttgaatttactttcgaatagtttgaggatt
cgagctcgcaatctaaacagattattggatcttcgagccaaaattggattggtgacagat
cgaatggagatgaagcgcgagttaggcaaacagttggttgttgatagatcggaagaagtc
gacggagaggaagaaaatgtggagtacaatgaggaagttgatgatgccggcttagaggag
gacgatgttgatgatgatgatgactacggaggaagtaatgataatgagatggatgttgat
tcgaatgaagtatacgttgggggtgagcagggatctgatgacgaacagtacagtgatgta
gaaggtgatgcatcatga
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