Brettanomyces nanus: FOA43_004128
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Entry
FOA43_004128 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bnn
Brettanomyces nanus
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bnn01009
]
FOA43_004128
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnn03019
]
FOA43_004128
04131 Membrane trafficking [BR:
bnn04131
]
FOA43_004128
03036 Chromosome and associated proteins [BR:
bnn03036
]
FOA43_004128
Enzymes [BR:
bnn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
FOA43_004128
Protein phosphatases and associated proteins [BR:
bnn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
FOA43_004128
Messenger RNA biogenesis [BR:
bnn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
FOA43_004128
Membrane trafficking [BR:
bnn04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
FOA43_004128
Chromosome and associated proteins [BR:
bnn03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
FOA43_004128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
Motif
Other DBs
NCBI-GeneID:
62197528
NCBI-ProteinID:
XP_038780299
LinkDB
All DBs
Position
4:complement(1875615..1877897)
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AA seq
760 aa
AA seq
DB search
MDVDSRPATSVPVISADVVNKKRSYTDIDEQKIKKEHMLGISEKVVDGDSAEFSNGIKYT
RDEKIDPKDVIVPVTKPKLNYVPLKTGICYDVRMRYHAKIFQSYLEYIDPHPEDPRRIYR
IYKILAENGLIDDPTLSGRDDIGDLMVKIPVRPATDSEILAVHTPEHLKFIKSTQSMTKE
QLLKETETGDSVYFNNDSYTSAKLASGGAIEACKAVIEGRVKNSLAVVRPPGHHAEPDAP
GGFCLFSNVSVAARAILKNYPESVRKIAIVDWDVHHGNGTQKAFFEDPRVLYISLHRYEQ
GKYYPGTPAGGADQVGSGPGEGFNVNIPWSTGGMGDAEYVYAFQKVVMPILYEFKPDFVI
VSSGFDAADGDPIGGCHISPAGYGQMTHSIKTLAQGNVCVILEGGYNLDSISVSALRVAK
VLLGEPPEVLQQNLPKPEAVIAISDVIKIQSRYWKSLKPGYFGLDFSLPQIMGDYDALLK
KSRDPTFVEVASKHSKLVDSVRAAQKSDLFDAYGFVSLPMVSDKKVETPSLKHQILCSPN
IYVADKILIVVHDPSRVWARRDPLTGDLDSASAVTVDQSLRFVDWGMKEDYGVIDISVPV
TVTGENDIYYNNISSAQDVLLYLWDNYIQYFKVQKICFVGVGDAYNGIVHLCGHRDIRHV
VMASINFLDAGTSLRAVVSSIDESIVDWFYRNSLVFTGHQHSCWGNSDRKANAKRPRKKY
GRVIRADCEGLDNVIDERFEEVCDFILDSLEDSEGESGTE
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgattcaagacctgctacatctgtgccggtaatttcagccgatgttgtcaat
aagaaaagatcttacaccgatatcgatgaacagaagataaaaaaagagcacatgttagga
atctccgagaaggtcgtggatggcgatagtgccgaattttccaacggaattaagtatacc
agagatgaaaaaattgatcctaaggatgttattgttcctgtgacgaagccaaagcttaac
tatgtgccgttgaagacaggtatttgttacgatgttaggatgcgttatcatgctaagatc
tttcagtcttacttggaatatattgaccctcatcctgaagatcctcgtcgtatctacaga
atttataagattcttgccgaaaacggtcttatcgatgacccaacgttgtcaggaagagac
gacattggtgatcttatggtgaaaatacctgttcgtccagctactgactcggaaattttg
gctgttcatactcccgagcatctcaagtttatcaaaagtactcagtctatgaccaaagag
cagctattaaaggagacagagaccggcgattccgtctatttcaataacgattcatatacc
agtgctaagcttgcctctggcggtgccatcgaggcttgcaaagccgttatagaaggacgt
gtgaaaaactctctggctgttgtgaggccaccgggacatcatgcagagcctgacgcacca
ggtggattttgtcttttctccaacgtgtctgttgctgctagggccatcttgaagaattac
cccgaatctgtgcgaaaaattgccattgtagactgggatgtccatcatggtaacggtacc
caaaaggcattcttcgaagatcctcgcgttctttatatctcactacacagatacgagcaa
ggtaagtattatccgggtactcccgcgggaggtgcagatcaagtaggctcgggtcctggt
gaaggtttcaacgtcaatattccttggtctactggtggaatgggtgatgctgaatatgtt
tatgcctttcagaaggttgtcatgcccattctgtatgaatttaaaccggattttgtcatt
gtttcttctggttttgatgctgcggatggtgatccaatcggcggatgtcatatttccccc
gctggctacggtcagatgactcactccatcaagacgcttgcccagggtaacgtttgtgtg
attcttgaaggaggctataatttggattccatatctgtcagcgctttacgtgtcgccaag
gtgctcttaggagagcctccagaggtgttacagcaaaacttgcctaagcctgaagccgta
attgcaatatccgatgttatcaagattcaatcacgttattggaagtcattaaaacctggc
tacttcggactcgatttctcattgccgcagatcatgggtgattatgacgccttgttaaag
aaatctagagatccaacatttgtggaggttgccagtaagcattctaagcttgttgattct
gtaagggcagcgcagaagtctgatctttttgatgcctatggatttgtttctttaccgatg
gtctcagataaaaaggtggaaactccatctcttaagcatcagattctatgttctccaaac
atttatgtagcagacaaaattcttattgttgtgcatgacccttcacgtgtttgggcaagg
cgtgatcctcttaccggtgacctagattccgcttccgcagttacagtggaccaatcacta
cgttttgttgattggggtatgaaggaagattacggtgttatagatattagcgtgcccgtc
acggtaacaggtgaaaacgatatctattacaacaacatcagttctgctcaggatgtgctg
ctctacctttgggataattatattcaatacttcaaagtgcagaagatatgctttgtgggt
gtgggtgatgcgtataatggtattgttcatctttgtggtcacagagacatccgccatgtt
gtaatggcttctataaattttttggatgcaggtacctccttacgtgctgtggtgtcttcg
attgacgagtcaatagttgactggttctaccgtaattcgctcgtcttcaccggacatcaa
cactcttgttggggtaattctgatcgcaaggctaatgcaaagagacccagaaagaagtac
ggtcgtgtgatacgtgcggattgtgagggtcttgataatgtaattgatgagaggtttgaa
gaggtttgtgacttcattctagattcgcttgaggattctgagggggaaagcggaactgag
tga
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