Brettanomyces nanus: FOA43_004207
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Entry
FOA43_004207 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
bnn
Brettanomyces nanus
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bnn03009
]
FOA43_004207
Enzymes [BR:
bnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOA43_004207
Ribosome biogenesis [BR:
bnn03009
]
Eukaryotic type
90S particles
Helicases
FOA43_004207
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
62197607
NCBI-ProteinID:
XP_038780378
UniProt:
A0A875S7C0
LinkDB
All DBs
Position
4:complement(join(2033529..2035876,2036016..2036024,2036070..2036076))
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AA seq
787 aa
AA seq
DB search
MHYDRDMARNYRTVSKQDKKKFRVQQAEDIEGLKKRVEEFDPAENSGITKFDELPLTKDT
LKGLQEAGYVNLTDIQRDAIPVCLQGHDILGAAKTGSGKTLSFLVPALERLMYEKWGELD
GVGALIITPTRELAVQIYEVLLKIGHYSTLSAGLVIGGKDYKYEKERIGRVNILIGTPGR
ILQHMDESATLNLDNLQMLILDEADRILDMGFHKTIDSILSDLPPQRQTLLFSATQTKSV
KDLARLSLVTPKYISTSTEQDITTPESLDQYYISTNLYEKLDILWSFIKAHITSKILVFV
SSSKQVHFIYECFRKLRPGVQLLKLHGRQKQKARMETTQQFTHASHCCLFATDVVARGLD
FPAIDWVVQVDCPEDATTYIHRVGRSARFGRPGKSLLMLTSSEEEPFLKRLESRKITVKK
LNVKGSKKKSIRNQLQSLCFESPELKYLGQKSFVSYCKSVFVQKDKEVFDLTKLPLEMYA
KSMGLPGTPSVKFMDRAKKGKGLTDAEMTKIKAKKNASRKLMIIENADDNGDVPEDKKVR
TKYDKMFERKNQSVLSEHYLQMTKGDDDDDTDDFLTVRRNVDEVDESELPPLELINTSKR
AMKRAMSKKLTAMKQGKGTKLVFDDEGHAHPIYVLQHEDDFHKEGPAMVLKEKFLHKEKE
TMNKEDELDKTVAKEKRTEKKRRRKEIEKQASLHEELSDEESAYTVVLGESDDQEEPDLD
KDLAMGEEVEREKRAEVESDDEEERPQKKVKLDETSDKDEQNVIEIEQPETIDDLEALTE
KLINNDA
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcattacgatagagatatggcaagaaattatagaacagtatctaaacaagataagaag
aagtttagagtgcagcaggccgaagatatcgaagggttgaagaaacgtgttgaagagttt
gatccggcagagaatagtggaatcacaaagtttgatgaacttccattaacaaaagacaca
ttgaagggacttcaagaagccggatatgtgaatttgacggatattcaacgtgatgctatt
ccagtatgtcttcaaggtcatgacattttaggggcagccaagacaggatcgggaaagaca
ctctcattcctagtaccagctctagagagacttatgtatgagaaatggggagaacttgac
ggtgttggggcactaattatcactccaacaagagaattagcagtacaaatatatgaggtg
ctacttaaaattgggcattattcgacgctttcagcaggtttggtcattggtggtaaagac
tacaagtacgaaaaggagagaattggccgagtcaacattcttattggtacacctggtcgt
attcttcagcacatggatgaatctgccacgttgaatttggataatttgcagatgttaatt
ttggatgaggcagatagaatcctcgatatgggattccataagactattgatagcatattg
agcgatcttcctccacagagacaaaccttactattttccgccacccagactaaatctgtt
aaggacttggctcgcttgtcactagttactcccaaatacatatccacttcgacagaacag
gatattactactccagaatcattggatcagtactacatatctacaaacttgtatgagaaa
ttggatattctatggagttttatcaaggcccacatcaccagcaagattcttgtatttgtc
tcttcatcaaaacaggttcatttcatatatgaatgttttagaaagttgcgtcccggcgtg
caactactgaagcttcatggaagacaaaaacagaaggctaggatggagaccacccaacaa
tttacacacgcaagccattgctgtttattcgcaacagatgtggttgcccgtggtcttgat
ttccctgcaattgactgggttgttcaagttgattgtccggaagatgccaccacatatatt
catcgtgttggacgatcagctagatttggaagaccgggcaagtcattactcatgttaact
tcaagcgaggaagaaccatttctgaaaagattagagtctagaaagattacagtgaagaag
ctcaatgttaagggatccaaaaagaaaagtattaggaaccaattacaatccctttgcttt
gaaagtcccgaattgaagtatcttggacaaaagtcttttgtttcttactgcaaatctgtg
tttgttcagaaagacaaagaggtgtttgatcttacgaagcttccattggagatgtatgct
aaatctatgggacttcctggtactccttcagttaaatttatggatcgtgccaaaaagggc
aagggattgacagatgcagagatgactaagataaaagccaagaagaatgcatccagaaaa
ttgatgattatcgaaaatgcagacgataatggagatgttccagaagacaaaaaggtgaga
acgaaatatgacaagatgtttgagagaaagaaccagagtgttttatctgaacattatttg
caaatgactaaaggagacgatgatgatgatactgatgactttctcaccgttcgacgtaat
gttgacgaggtggatgagagtgaactaccacctttagagttaatcaatacgtctaaaaga
gcaatgaagcgagccatgtcaaagaaattaactgcaatgaaacaaggaaaaggtacgaag
ttggtatttgatgacgaaggtcacgcccatcctatatatgttttgcaacatgaagacgat
ttccataaagaggggccagctatggtgctcaaggagaagttcttacataaggagaaggag
actatgaacaaggaggatgaattggataagaccgttgcaaaagaaaaaagaacagagaaa
aagagaagaagaaaagagattgaaaagcaagcttcattgcacgaagaactttctgatgag
gagagtgcctacactgttgttttaggagaatcggatgaccaggaggaaccagatctagat
aaagatttggcaatgggagaagaagtggaaagagaaaagagagctgaagttgaaagcgat
gacgaagaagaaagaccccaaaagaaggtgaagttggatgaaacgtccgataaggacgag
cagaatgtcatcgagatcgaacaaccagaaactattgatgatttggaggcattaacggag
aagttgataaacaatgatgcttga
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