Brettanomyces nanus: FOA43_004217
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Entry
FOA43_004217 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
bnn
Brettanomyces nanus
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bnn03009
]
FOA43_004217
Enzymes [BR:
bnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOA43_004217
Ribosome biogenesis [BR:
bnn03009
]
Eukaryotic type
Pre-60S particles
Helicases
FOA43_004217
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
62197617
NCBI-ProteinID:
XP_038780388
UniProt:
A0A875S7D1
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Position
4:2054741..2056474
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AA seq
577 aa
AA seq
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MSKVEVAKDYVDEEVSFESFHLDPRLLQAIIKLGYEHPTLVQTQAIKLSLDEKKDIIARA
ATGSGKTAAYCIPIVQSILSNQQDQQDKEQAEHSIHAVILVPTKELSQQVYEFLNELTIY
CGKVVKLLNLSDSVDDDLLVSLVNEQPEVIISTPSKLVTMLEKNKKLSLTQLKYMVIDEV
DLVVSYGYSDDLEKLTKYLNLKQEMQMFLMSATLNEDVAELKSKFCSKPAVLKLQDLADN
SKELAQYYIKTNELDKFLLVYVILKLKLIRGKILVFVNDLERGYRLKLYLQNFGLRACVL
NSELPLNSRLHIVEQFNKNVYNLLIATDDSNYYDDEDLSSSKSSKSSKNSKDSKNSENSK
TPSEYSASRGVDFQNVACVLNFDLPTSSKAYVHRVGRTARAGKAGIALSFIVNNKDWGKH
KASSLASARKDEKVLARIEKTQKKLGFELQPYQFDTKQLDNFRYRMEDSFRSVTKAAIRD
ARLREIKMELITSDKLKRHFEENPEDLATLRHDKAVSKVRSDRNLQDVPDYLLPKAVRLD
PKKITFIPFNKSNGKTSKKRRRKEGGKKVDPLKKFRR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagtggaagtggctaaagattacgttgatgaggaagtttcatttgagtcattc
catttagatccaaggcttcttcaagctattatcaaattaggctatgagcatcctacttta
gttcagactcaggctatcaagctctcgttagatgaaaagaaggatattattgcccgagct
gcgacgggttcgggtaaaactgcagcttactgtattcccattgttcaatccatactatcc
aatcaacaggatcagcaggacaaagaacaggcagaacatagtattcatgctgttatacta
gttcccacaaaagagctctctcagcaagtgtacgagttcttgaatgagttgacgatttat
tgtggtaaggtggtgaagttgctcaacttgagtgattcggtggatgatgatttactcgtt
tctttggtcaacgaacagcctgaagtgattatatcaactccatcgaagttagtgacgatg
ttagaaaagaacaaaaagttgagtctaactcaactcaaatacatggtgatcgacgaggtt
gatttggtggtcagttacggttatagtgatgatcttgaaaagctcacaaaatacctaaac
ttaaaacaagagatgcagatgtttctaatgagtgccacgttgaatgaagatgtggccgaa
ctcaagagcaagttttgcagtaagcctgccgttttgaagttgcaggatttggcagataac
tcaaaagaattggctcaatattatatcaaaactaatgaattggataaattcttgttggtc
tacgtgattctcaagttgaagcttattcgaggaaagattttggtgtttgtcaatgactta
gaaagaggttataggttaaagttatatcttcagaactttggacttcgggcctgtgttctt
aattcggagcttcccttgaattctcgtcttcatattgttgagcagttcaacaagaatgtg
tacaatttgttgatagctactgatgattcgaactattatgatgatgaggacttatcgagt
tcgaagagctcgaagagctcgaagaattcaaaagattcaaagaactcagagaactcgaag
actccttcggaatatagtgcttctagaggtgtcgacttccagaatgtggcatgtgtctta
aactttgatcttccaacatcatccaaggcatacgttcatcgtgttggacgtacagcaaga
gcaggtaaggcaggtatcgctttatcgtttattgttaacaacaaagattggggcaaacat
aaagcatcttcattggccagtgctaggaaggacgaaaaggtgttggctagaattgaaaag
actcagaaaaagcttggattcgagttgcaaccttaccagtttgatacgaagcagttggat
aatttcagatacagaatggaggattcattcaggtctgtgaccaaagctgccatcagagat
gcacggttgagggagattaagatggaattgataacatctgataagttgaagaggcatttt
gaggagaacccagaagacttggctacattgaggcatgataaagcggtttctaaagtgaga
agtgaccggaatcttcaggatgttcccgattatctcttacctaaagcagttagactggat
ccaaaaaagattacatttattcctttcaacaaaagcaatggaaaaaccagtaagaagaga
agaagaaaagaaggtggaaagaaggtggatcctctcaagaagtttaggaggtaa
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