Brettanomyces nanus: FOA43_004351
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Entry
FOA43_004351 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K12821
pre-mRNA-processing factor 40
Organism
bnn
Brettanomyces nanus
Pathway
bnn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOA43_004351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bnn03041
]
FOA43_004351
Spliceosome [BR:
bnn03041
]
Complex A
U1 snRNP components
U1 related factors
FOA43_004351
Complex B
FOA43_004351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Glyco_hyd_101C
DUF5580_M
HFX_2341_N
Motif
Other DBs
NCBI-GeneID:
62197751
NCBI-ProteinID:
XP_038780522
UniProt:
A0A875RXM5
LinkDB
All DBs
Position
4:complement(2342057..2343676)
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AA seq
539 aa
AA seq
DB search
MAWEEIVDDKGRVYYYNSDTEETQWERPKSFGGDDSKIDKILAKNDWSRYTTDEGEVYYF
NEKTEKSVWELPEDVIRDFKKEEVKETRPGQKEKEKEKEKENGESRINSLGDRTEEVWEE
GGQGQGPLIKQKTLSRANDIVGLNEIIPKSEDGIAEYSDDIEHNVDNNEDHEDQEDNKED
EIAKQGFVDMLKEKEIDSSWPFSKVMSSCIEDDRYWRIHDPLMRKQLHQIYLIGKADEEY
KRVEKSKQAYKKKFLEVLKEHKVEYYRRWRSVGKELTDEPICSVIPSKLKQEFFKEYVDE
LRAKHDAEIDDVKKQQLCKLREQIAAVGKFNSRFEEVLHGLYLESKYPTVDKIDALRIFE
SEMEKKDLELEDKMKQSSRLNYRVDRQARDRFRKLLEGLSEHEDVTFNAKMKWVEFLDLI
REKPAFIELCGHKGSSAIDIYWDILDRENQLVRAKRDMCRQKLASHKLNIKSFEGNLDTF
KAKMDEIGGIHSDDKDIGQVFELLQEEVSNKRKMETMGRSSSPGPKKARLARMGYGILQ
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcatgggaagagatcgttgatgataaaggtcgtgtttattactataattcagacaca
gaggaaactcaatgggagagaccgaaatcatttggtggagatgattccaagatagataag
atattagctaagaatgattggtctaggtatacgacagatgaaggagaagtatattatttt
aatgagaagacggagaaatcggtctgggaattacctgaggatgttattagggatttcaag
aaagaagaagtgaaggaaacaaggccagggcagaaggagaaggagaaggagaaagagaaa
gagaatggagagtccagaattaattcactaggtgatcgaactgaagaagtttgggaggaa
ggaggacaaggacaaggaccattgataaagcagaaaactttgagtcgagccaatgatatt
gtgggattgaatgagataataccaaagtcagaggatggaattgctgaatattcggatgat
attgaacataatgtagataataacgaagatcatgaagatcaagaagataataaagaggat
gaaattgccaaacaagggtttgttgatatgttgaaagagaaagaaattgattctagttgg
ccgttttcgaaagtgatgagctcatgtatcgaagacgatcgatattggagaattcatgac
ccattaatgaggaagcaattgcaccagatatatctgattggaaaagcagatgaagagtat
aagagagttgaaaagtccaaacaggcgtataaaaagaagtttttggaagttttgaaagag
cataaggtggaatattatagacggtggagaagcgtgggcaaggagctcaccgatgagcct
atctgttctgtgatacctagtaaattgaagcaggagttctttaaagaatatgtggatgaa
ttaagggctaagcacgatgcagaaatagacgatgttaagaagcagcagctgtgtaagttg
agagagcaaattgctgcagtagggaagttcaacagtcgatttgaagaggtgttacatggt
ctatatcttgagagtaagtatcctacagttgacaagattgatgccttgagaatatttgag
tctgagatggaaaagaaagacttagaattggaagataagatgaaacagagcagtcgattg
aactatcgagtggacagacaggccagagatcggttccggaaacttcttgagggactgtct
gaacatgaagatgtaacattcaatgccaagatgaaatgggttgaatttctggatctgatc
agggaaaaacctgcatttatagagctctgtgggcacaaaggatcatcagcaattgatatt
tattgggatattcttgatagagaaaaccagttggttcgtgcaaagagagatatgtgtcgg
cagaagttggctagccataagttgaacatcaagagctttgaagggaatctagatacgttt
aaggccaagatggacgaaatcggaggcatccatagtgatgataaggatattggccaagta
tttgaactactacaagaagaggtgagtaataaaaggaagatggaaactatgggtcgtagt
agctcaccaggtccaaagaaggctcgcttggcaagaatggggtacggaatcttacaatag
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