KEGG   Brettanomyces nanus: FOA43_004351
Entry
FOA43_004351      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K12821  pre-mRNA-processing factor 40
Organism
bnn  Brettanomyces nanus
Pathway
bnn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FOA43_004351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bnn03041]
    FOA43_004351
Spliceosome [BR:bnn03041]
 Complex A
  U1 snRNP components
   U1 related factors
    FOA43_004351
 Complex B
    FOA43_004351
SSDB
Motif
Pfam: FF WW WW_TCERG1 Glyco_hyd_101C DUF5580_M HFX_2341_N
Other DBs
NCBI-GeneID: 62197751
NCBI-ProteinID: XP_038780522
UniProt: A0A875RXM5
LinkDB
Position
4:complement(2342057..2343676)
AA seq 539 aa
MAWEEIVDDKGRVYYYNSDTEETQWERPKSFGGDDSKIDKILAKNDWSRYTTDEGEVYYF
NEKTEKSVWELPEDVIRDFKKEEVKETRPGQKEKEKEKEKENGESRINSLGDRTEEVWEE
GGQGQGPLIKQKTLSRANDIVGLNEIIPKSEDGIAEYSDDIEHNVDNNEDHEDQEDNKED
EIAKQGFVDMLKEKEIDSSWPFSKVMSSCIEDDRYWRIHDPLMRKQLHQIYLIGKADEEY
KRVEKSKQAYKKKFLEVLKEHKVEYYRRWRSVGKELTDEPICSVIPSKLKQEFFKEYVDE
LRAKHDAEIDDVKKQQLCKLREQIAAVGKFNSRFEEVLHGLYLESKYPTVDKIDALRIFE
SEMEKKDLELEDKMKQSSRLNYRVDRQARDRFRKLLEGLSEHEDVTFNAKMKWVEFLDLI
REKPAFIELCGHKGSSAIDIYWDILDRENQLVRAKRDMCRQKLASHKLNIKSFEGNLDTF
KAKMDEIGGIHSDDKDIGQVFELLQEEVSNKRKMETMGRSSSPGPKKARLARMGYGILQ
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggcatgggaagagatcgttgatgataaaggtcgtgtttattactataattcagacaca
gaggaaactcaatgggagagaccgaaatcatttggtggagatgattccaagatagataag
atattagctaagaatgattggtctaggtatacgacagatgaaggagaagtatattatttt
aatgagaagacggagaaatcggtctgggaattacctgaggatgttattagggatttcaag
aaagaagaagtgaaggaaacaaggccagggcagaaggagaaggagaaggagaaagagaaa
gagaatggagagtccagaattaattcactaggtgatcgaactgaagaagtttgggaggaa
ggaggacaaggacaaggaccattgataaagcagaaaactttgagtcgagccaatgatatt
gtgggattgaatgagataataccaaagtcagaggatggaattgctgaatattcggatgat
attgaacataatgtagataataacgaagatcatgaagatcaagaagataataaagaggat
gaaattgccaaacaagggtttgttgatatgttgaaagagaaagaaattgattctagttgg
ccgttttcgaaagtgatgagctcatgtatcgaagacgatcgatattggagaattcatgac
ccattaatgaggaagcaattgcaccagatatatctgattggaaaagcagatgaagagtat
aagagagttgaaaagtccaaacaggcgtataaaaagaagtttttggaagttttgaaagag
cataaggtggaatattatagacggtggagaagcgtgggcaaggagctcaccgatgagcct
atctgttctgtgatacctagtaaattgaagcaggagttctttaaagaatatgtggatgaa
ttaagggctaagcacgatgcagaaatagacgatgttaagaagcagcagctgtgtaagttg
agagagcaaattgctgcagtagggaagttcaacagtcgatttgaagaggtgttacatggt
ctatatcttgagagtaagtatcctacagttgacaagattgatgccttgagaatatttgag
tctgagatggaaaagaaagacttagaattggaagataagatgaaacagagcagtcgattg
aactatcgagtggacagacaggccagagatcggttccggaaacttcttgagggactgtct
gaacatgaagatgtaacattcaatgccaagatgaaatgggttgaatttctggatctgatc
agggaaaaacctgcatttatagagctctgtgggcacaaaggatcatcagcaattgatatt
tattgggatattcttgatagagaaaaccagttggttcgtgcaaagagagatatgtgtcgg
cagaagttggctagccataagttgaacatcaagagctttgaagggaatctagatacgttt
aaggccaagatggacgaaatcggaggcatccatagtgatgataaggatattggccaagta
tttgaactactacaagaagaggtgagtaataaaaggaagatggaaactatgggtcgtagt
agctcaccaggtccaaagaaggctcgcttggcaagaatggggtacggaatcttacaatag

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