KEGG   Brettanomyces nanus: FOA43_004416
Entry
FOA43_004416      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
bnn  Brettanomyces nanus
Pathway
bnn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FOA43_004416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bnn03041]
    FOA43_004416
   04121 Ubiquitin system [BR:bnn04121]
    FOA43_004416
Spliceosome [BR:bnn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    FOA43_004416
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    FOA43_004416
Ubiquitin system [BR:bnn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    FOA43_004416
SSDB
Motif
Pfam: HIND SART-1
Other DBs
NCBI-GeneID: 62197816
NCBI-ProteinID: XP_038780584
UniProt: A0A875SBZ1
LinkDB
Position
4:complement(2463912..2465303)
AA seq 463 aa
MRISLSVEETNKLRAQVGLCPIPVEGEKLEIQYESQKPLAVNMRKDEDGCYSISVEETNK
LREQIGLGLISIGGYLTENVGGKESESGKKAGRLRANLLKAKNELKKEKYLSRGGILDRI
GDDKDEHDWLTRLGEREKGKGKKKLRFKGKSKKEETADELSFAHNDEKGEVILTLKDKLI
NGESADEDELENIEMVEKERIREAMKNRTQGRMIDLEDEEDGSSNMGGKKVNQESNSKRK
LIVLKDDSDDNEDSSGIIKRSDFKRIKRVREDGNKFKRTDRFTVDKEAFKKIRIVNEDME
KEDNLELNSFMSATRKRRLEKRLESRRKEISAEESNVELIKNSLVIDEDADFLDRLDSIN
KGGEVELKDRTQSRNSTSEDSKGFSSAVLERVSTILDDSSSNSQSMGVSSVLKLLKNEEQ
ASGKPKDPSNGISLVYTDDKGKVLSTKEAYKYLSHKFHGYRKH
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgcgtatttcacttagtgtagaggaaacaaacaagcttcgagctcaggtgggtctctgt
cctattcctgttgaaggggagaagttggaaattcagtatgaatctcagaaaccattggct
gttaacatgagaaaagacgaagatggatgctattcgatatcagttgaagaaaccaataaa
ttgagggagcagattggtcttgggcttatttctattggaggatatctgacggaaaatgtt
ggcggaaaggaatccgaatctggtaagaaagctggtagacttcgagccaatttgcttaag
gctaagaatgaattaaagaaggagaaatatttatcaagaggaggtattttagatagaatt
ggtgatgacaaagatgagcatgattggttaacgagattgggagaaagggagaagggaaag
gggaaaaagaagttaagatttaaagggaagagtaagaaggaagagactgctgacgaactc
agttttgctcataatgatgagaagggtgaagtgattctaacattgaaagataaattgatt
aatggtgaatctgctgatgaagatgaattagagaacattgaaatggttgagaaggaaagg
attcgagaagcgatgaaaaatcggactcaaggaaggatgattgatctagaagatgaagaa
gatgggtcgtctaatatgggtggtaaaaaggtcaatcaggagtcgaattccaagagaaaa
ttgattgttttgaaggatgatagtgatgataatgaagatagtagtgggattataaagaga
tctgatttcaagagaataaaaagagttagggaagatggtaataagtttaaacgaactgac
agatttacagtagataaagaagcattcaagaagattcggatcgtcaatgaggatatggag
aaagaggataacctagagttgaacagttttatgtctgcgacgagaaagcgcaggcttgaa
aagaggcttgaaagcagacgtaaggagatttcagccgaagaatcgaacgtcgaattgatc
aagaacagtctggtcattgatgaggatgcagatttcttagacaggttggatagcattaat
aagggaggagaagttgaactaaaggatcgtactcaatcaaggaactctacttctgaagac
tcgaagggcttttcttctgctgttcttgaacgagtctctacaattctagatgactcgtca
agcaattcccagtctatgggggtatcttcagtgctaaagcttcttaaaaacgaagagcag
gcttctggaaagcctaaggacccctccaacggtatatctttggtttacaccgacgacaaa
ggtaaggtgttatccacaaaggaagcctataagtatctatctcacaagtttcatggttat
agaaagcattag

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