Brettanomyces nanus: FOA43_004466
Help
Entry
FOA43_004466 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K12856
pre-mRNA-processing factor 8
Organism
bnn
Brettanomyces nanus
Pathway
bnn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOA43_004466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bnn03041
]
FOA43_004466
Spliceosome [BR:
bnn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
FOA43_004466
Complex C
U5 SnRNP specific factors
FOA43_004466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
Motif
Other DBs
NCBI-GeneID:
62197866
NCBI-ProteinID:
XP_038780633
UniProt:
A0A875S800
LinkDB
All DBs
Position
4:complement(2557688..2564992)
Genome browser
AA seq
2434 aa
AA seq
DB search
MPPKHHAAPPPGLGNKRSRRTAGGTNGANGGHRAPPPPPPPPSRSHISRGALGPQLRPPP
PPPPGLRSRTRSRHSMADESLQRRKRQWLQLQKKRFVSSSSKGFRGSKGSHGGISHLRME
MPPEHLRKIINDQADLSSRRFTQEKRAVLGALKYLPHAILKLLENMPPPWEAAREVRVAY
HIAGAITFVDESPRVISPVYEAQWATAWLQMRREKRDRRHFKRMRFPPFDDEEPFIDYSA
YIEDLDPPEPIRMDLDSIEDAAVAEWLYDNRPLADDPRKLVNGPSYRRWNLPLSAASALY
RLSTPLQIADTNFPQYLFDRESLFTAKALNIALPGGPKFEPLNKDLAPEDEDFSEFNSLD
RIIYRGPLRSEYRVAFPYLYNSMVRGVCTSWYSFPTEMYMRSDDPDTPVFYYDRRLSEIR
AVKKREKAGAETPAEIEGFPPFLDEEPLIPRYRISDTDANTDAAAAIAAFDLWSAPPPFD
RRSGTTRRAQDVALVKPWYLHRAARNSPVKVRISAQKLLKTVVANDLHRAPPAESAAVLI
RSLRGTKYFQETTIDWTEAGIQVCRQGYNMLNLLIHRRGLTYLHLDYNFNLKPTKTLTTK
ERKRSRFGNAFHLIREILRLTKLIVDAHLQYRLGNVDAYQLADGIYYALNHVGQLTGIYR
YKYKVMHQIRACKDLKHVVYQRFNAAVGKGPGCGFWQPAWRTWLFFLRGIIPLLERWLGN
LLSRQFEGRQAKEVAKTVTKQRVDSYYDLELRAAVLRDILDMIPPGVRESKSKTVLQHLS
EAWRCWKANIPWQVPGMPKPVADIIERYVKAKADGWISVAHYNRERIRRGATVDKAVAKK
NLGRLTRLWIKNEQERQMGYQKDGPYVSPDEAVGVYKTMVWWLSERRFVPIPFPPVNYKH
DTKILVLALENLKSRYAAKSRLNSTERSELALIEQAYDNPHEFLANIKKTMLTQRNFKPL
TLQMADNYSQIIPTYDVEPLEKIVDAYIDQYLWYEADKRGLFPNWVKPADSEIPPLLVYK
WCQGINNVADVWDVGDDQRNVMIELNLGKLAEKVDLTLLNQMLRLIVDSNIADYITAKNN
VGLTYKDMTHVNQYGLVRGLQFSSFVLQYYGLAMDLLLLGPERAADLAGEPERPNEFMEF
ASEAVQKKSPIRCYSRNLNVVHIFFRFSRRQAADLVQDYLNANPDPNFASIVGYNNRRCW
PRDQRMKLMRADVHLGRAVFWEMQGRVPLSLADIRWEDALASVYSRENSNVLFKMSDFDV
RVQPVAASSGGASSSVSASGNSAGAESTWDLTDESSKEITANAHLQVSAEAIAAFDYNIR
HILMSAGSATFTKIASRWNTALLSLFVYFREAIVGTPQLLEVLVRCETKIQTHVKLGLNS
KMPSRFPPAVFYTPKELGGLGMLSASHILIPASDLRWSRQTDTGITHFRAGMTHDDDRLI
PTIFRYITTWENEFLDSQRVWTEFAQKRADAEKSRRRLTFEDLEESWNRGLPRISTLFQK
DRQTLAVDKGYRVRKQFKRYQEAYSNAFWWLSDRHDGKLWNLNAYRTDVIQALGGIETIL
EHTLFKGTGFSSWEGLFWEKASGFEDTMKFKKLTNAQRSGLSQIPNRRFTLWWSPTINRA
NVYVGFLVQLDLTEVFLHGKIPTLKISLIQIFRAHLWQKIHESLVVDLCQVLDSNLDDLQ
ADAVEKLPIHPRKSYKMNASTADILLTAASRWTCGRPSLLFDAETSAGTGRIASSTASST
AFWFDVQLRYGDYDSHDISRYARAKFLDYTSDNTSVYPSTTGALIAVDLAYNMYDAYGTW
FPGLKPLIQKAMQTIMKANPALYVLRERIRKGLQLYQAQPQEAFLSSRNYAELFSSDNKL
IVDDSNVYRVVSHSTFEGNTAVKVLNGALFMMNPKTGQLFLKVIHSSVFQGQKRRTQLSK
WKAAEEVAALVRSLPREEQPRQIIITRKGLSDPLEVHLLDFPSISIRPTELHMPFNAALK
IDKLQEIVSMAKEPQMVLFNVYDDWMKTCSSFTAFNRLVLLMRGLQVNVDKTKLILRADS
SIHTAAHHLWPTLSDEQWRLIESQLADMILSDYSKKYSVNINSLTDNEIRDIILGQDINA
PSARRQQIAEIEGANTGDAASSATAAATAATAVKTVTTNVHGEQIVTVTTNAQETQQFTS
RADWRARALATGTLHRRAQKVYVESGDLADVDAFAYVMPKNLLAKFIACSDTRTQVGGYL
YGVSPPDNGQVKEVRCIAMVPQVGDIHRVEFPLQQIQSKLLAGLEPLGWVHTVPTGTEVG
LELMGTVAASAATAPQASSADQVAQVFPVALAVEFTPGSVTIAANTATTQGIQWAQANAA
SSGSSIAPEGYQDSFVKKSPLILTDNFKGFFLVPEMDVWNYSFVANAWSRDMKYGLKLDN
PLPFYHELHRPIHFDAFNQIEGGQLEADQEDVLA
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgaaacatcatgcagcacctccgccaggactaggaaataaacgttcaaggcga
accgccggcggtaccaacggtgccaacggcggtcatcgggcaccgcctcctcctcctcct
cctccatcacggagtcatattagtcgcggagctcttggaccgcaattgcggccgccacct
ccgcccccaccaggacttcgatcgcgaacacgatcgcgccattctatggcggatgagtct
ttgcagcggcggaagcggcaatggcttcaacttcaaaaaaagcgctttgtcagctccagc
tctaaaggctttaggggctccaagggctctcacgggggcatctctcatctccgtatggag
atgccaccagaacaccttcgaaaaatcatcaacgatcaagcggatctttcttcgcgccgt
ttcacacaggaaaagcgggccgttttaggagcactcaaatatcttccgcacgccattcta
aaacttcttgaaaacatgccaccaccatgggaagcggcccgtgaagtgcgtgtcgcgtat
catatagcgggggctatcacgtttgtggacgaatctccgcgtgtcatttccccagtttac
gaggctcaatgggctaccgcctggcttcagatgcgtcgcgaaaagagggaccgccgccat
tttaaacgtatgagattcccgccatttgacgacgaggaaccgttcatcgattattctgct
tatatagaggatttagatccaccagaacctattcgcatggatttggattctattgaagat
gccgccgttgccgaatggctttatgacaatcgaccactcgccgacgaccctcgcaaactc
gtcaatggaccatcctaccgccgctggaacttgcctctttctgccgcgtccgccttgtac
agactttctacgccgctacagattgccgacactaattttccgcagtatctttttgatcgc
gaatcattattcaccgctaaggctttaaatattgcactacctggagggccgaagttcgag
ccgcttaacaaagacctcgctcctgaagacgaggacttcagtgagttcaactccttggac
agaatcatctaccgcgggccgctacgttctgagtacagagtagcgtttccttatctatat
aactcgatggtacgtggcgtttgcacttcctggtatagttttccaacagaaatgtatatg
agaagtgatgatcccgacactccagtgttttactacgacaggcggttgtcggagattcgc
gccgtcaaaaagcgtgaaaaagcaggagcggagacacctgcggaaattgaaggatttccg
ccatttttggacgaagaaccgttgattccacggtacaggatctctgataccgatgccaat
accgatgcggccgctgcaattgccgctttcgatctctggtccgcaccacctcccttcgat
cgccgtagcggaaccacacgtagagcccaagacgttgcgctggtcaagccttggtacctt
catcgcgcggctcgaaattcccccgtcaaggtgcgaatctccgcgcaaaaactcctcaag
acggtggttgccaacgatcttcacagggcgccgcctgcggaatccgccgccgtgcttatc
cgctcacttcgcggcacaaaatactttcaggaaaccacaattgattggaccgaggcggga
atccaggtttgccgacagggctacaacatgctcaacctcctgatccatcgccgcggtctc
acctatcttcatcttgattataatttcaaccttaaaccgacaaagacacttaccaccaag
gaaaggaagcgatcccgctttggtaatgctttccatctcattcgcgagattcttcgtctt
acaaagctcatcgtcgacgcgcatcttcagtatcgactcggcaacgtggacgcgtatcaa
ttggcggacggcatctactatgcactcaatcacgtcggacagctaacgggaatctaccgc
tacaaatacaaagttatgcatcagatccgcgcatgtaaagatctcaaacacgtcgtttac
cagcggttcaacgccgccgtcggaaagggtcctggctgcggattctggcagccggcgtgg
cggacatggctattttttttgcggggaatcatcccgcttctcgaacgatggttgggaaat
ttgctttcgcgacagttcgagggccgccaggctaaggaggtggccaaaacagtcaccaaa
caacgagtcgattcttactacgatttggagctccgtgcagccgttctgcgggatatcctt
gacatgatcccccccggtgtgcgggagagcaaatcaaaaacagttcttcaacacctcagt
gaggcctggaggtgctggaaggcaaatattccttggcaagttccaggaatgcccaaaccg
gtggcggatatcatcgagcggtacgtcaaggcaaaggcggacggctggatctctgtcgct
cattataaccgcgagaggatacggcggggagcgacggttgacaaggcggtggccaagaaa
aacttgggccgtcttacgcggctatggatcaaaaacgagcaggagcggcaaatgggatac
cagaaggatggaccttatgtgtctcccgacgaggctgtaggtgtgtacaagactatggtg
tggtggttgtcggaacgacggtttgttccaatcccctttccgcccgtcaattacaagcac
gacaccaagattcttgttctcgcgctcgagaatcttaagtcgcgctatgccgccaagtcg
cggctcaactccaccgagagatcggagctcgcgctcatcgaacaagcgtacgacaacccg
cacgagtttctagccaacatcaaaaagacgatgcttactcagcgtaacttcaagccgttg
actctacagatggcggataactatagccagatcatcccgacctatgacgtagaaccgcta
gagaagatagtggatgcctacattgaccaatatctctggtacgaggcggacaagcggggg
cttttcccgaactgggtgaagcccgccgattcggagatcccgccgcttttagtctataaa
tggtgtcagggaattaacaatgtggcggacgtctgggatgtcggtgacgaccagcgaaat
gtgatgatagagttgaatttgggcaagctagcggagaaagtcgaccttaccttactcaac
cagatgctccgactcattgtagactctaatatcgccgactatatcaccgccaagaacaac
gtcggtctgacttacaaggacatgacgcatgtcaaccagtacggcttagtccgcggtcta
cagttttcttcttttgttctgcaatactacggattggctatggacctgctgctcttgggt
cccgaaagagccgccgacttggcgggagaacctgagcggcccaacgagttcatggaattc
gcgtcggaagcggttcagaagaaatcgccgattcgctgttattcgcgaaaccttaacgtg
gtgcacattttcttccgcttttccaggcggcaggcagcggaccttgtccaggattatttg
aatgccaatcccgacccgaactttgcctcaatagtcggctacaacaaccgccgatgctgg
ccgcgagaccagaggatgaagctaatgcgggccgacgtacatttaggcagggcagtcttt
tgggagatgcaaggccgtgtgccactttctttggcggacatccgctgggaagatgcgctc
gcttcggtttattccagagagaattcaaatgtcttgttcaaaatgtcagactttgatgtg
cgggtgcagcccgtggccgcaagttccggaggagcttctagtagtgtttctgcctccggc
aattccgctggtgccgaaagtacctgggatctcaccgacgaatcctcgaaagaaatcacc
gctaacgcacatctccaggtctccgccgaggccatcgccgctttcgattacaatatccgc
catatcctcatgagcgcgggctccgccacgtttaccaaaatcgcatcccgatggaatacg
gctcttctctcactttttgtctacttccgagaagccattgtgggaactccccagcttctt
gaggtgttggtgagatgcgaaacaaagatccagactcatgtgaaacttggtctcaattcc
aagatgccgtcgcggttcccgcccgcggtgttttacacgccgaaagaacttggcggcctt
ggcatgcttagcgcatcccacattcttatcccagcgtccgacttgcggtggtcacggcag
acagatacgggaatcacacactttcgcgcgggcatgacacacgacgacgaccgcctcatc
ccaacgatattccgttacatcaccacctgggaaaacgagttcttggattctcagcgggtg
tggaccgaatttgctcagaagcgcgccgacgcggaaaaatcgcggcgccgcctcacgttt
gaggatttggaagaaagctggaatcgcggattgccgcgaatcagtactctatttcagaaa
gaccgtcagactttggcggtggataagggatacagagtaagaaagcaatttaagcggtat
caagaggcgtacagcaatgcgttctggtggttgtcggaccgtcacgacggaaagttatgg
aacttgaatgcttatcgtaccgacgtaattcaagcgcttggcggcatcgaaactatcttg
gagcatacacttttcaagggaaccgggttctcgtcttgggaagggcttttctgggaaaag
gcttcgggtttcgaagatactatgaagtttaagaagctcaccaatgcacagcggtccgga
ttatcgcagattccaaatcggcgcttcactttatggtggtcgccgacgatcaatcgggca
aacgtttacgtcggctttttggtccaattggatttgactgaagtatttctccatggaaaa
atcccgacgctcaagatttcgctcatccagattttccgcgcgcatttgtggcagaagatc
cacgagtctttggtggtggatctttgtcaggtcttggacagtaatttggatgatttgcag
gccgatgccgtggagaagttacctattcatccgcggaagtcgtacaagatgaatgcttcg
acggcagacattttgttgacggcagcctctcgatggacgtgtggccgcccatcgttgttg
tttgacgcggaaacgtctgcaggaactggccggatcgcgtcgtccaccgcgtcttccacc
gcgttttggttcgacgttcagctgcgttacggggattacgattcccacgacatttcgcgg
tacgcgcgggcaaaattccttgactacacctccgacaataccagcgtgtatccatccacc
accggcgcccttatagcggtcgacttggcgtacaacatgtatgatgcatatggaacctgg
ttcccaggtctcaaaccgcttattcaaaaagcgatgcaaacaatcatgaaggccaatccc
gctttatatgtgctccgcgagcggatcagaaagggacttcaattgtaccaggcgcagccg
caggaagcgtttcttagttccagaaattatgcggagctatttagctccgacaacaagctg
attgttgatgacagcaacgtttatcgggtagtttcgcactcgacatttgaaggaaataca
gcggttaaagttcttaacggagctttgttcatgatgaatccgaaaacggggcagttgttc
ttaaaggtgattcacagctctgttttccagggtcagaaacggcggacccagttgtctaaa
tggaaggccgccgaagaagttgccgctctcgttcgttcgttgccccgcgaagaacaaccc
cgccaaattattattacgcgcaagggcctgtcggaccctttggaggttcatttactagat
tttccaagcatttcgatccggccaacggagttacatatgccatttaatgcagccttgaag
attgataagcttcaggaaatcgtaagtatggccaaggagccgcagatggtacttttcaac
gtctatgatgactggatgaaaacgtgttcatcgttcaccgccttcaaccgacttgtttta
ctcatgcgcggcctacaggtaaacgtcgacaaaacaaaattaattttgcgggccgacagt
tctatccacaccgccgcccatcacttgtggcccacactatcagatgagcagtggcgattg
atagagtcccagttggcggacatgattcttagcgactattcgaagaagtactccgtgaat
atcaactcacttaccgataacgagatcagggatattatattgggtcaggatattaatgct
ccttcggcgcgcagacagcagatagccgaaatcgaaggtgcgaacacgggcgacgcggcc
tcttcagccactgccgctgccaccgcggccaccgcggtgaaaaccgtaaccaccaatgtt
cacggtgaacagatcgttactgttactaccaatgcgcaagaaactcagcaattcacttca
cgggcagattggagagccagagcattagccacgggaacccttcatcggagggcccagaag
gtttacgtggaaagcggcgatctcgccgacgtggacgcctttgcctatgtgatgccgaag
aacttgctcgcgaaatttatagcgtgctccgacacccgcacccaggtcggtggatatctc
tatggagtgtctccgcctgataacggccaggtgaaggaggtgcggtgcattgcgatggtt
cctcaggtgggcgacattcaccgggtggaatttcctttgcagcaaattcagtcgaagttg
ttagcgggactggaaccacttggatgggtgcacactgtgccgacggggaccgaggtaggc
ttggaattgatgggtaccgtggcggcatctgctgctactgccccccaggcctcctcagcg
gaccaagtggcccaagttttcccggtggccctcgcggtagaatttacccccggctctgtt
accatcgccgcaaacaccgccacaacgcagggaattcaatgggcccaagcaaacgccgct
tcttcgggcagctcaattgccccagaaggttatcaggactcgttcgttaagaaatcccct
cttattcttactgacaacttcaagggcttcttcctggtgccggaaatggatgtttggaat
tactcatttgtggcgaatgcatggtcacgtgacatgaaatatggtctcaagttggataat
cctttaccgttttatcacgaattgcacagacctattcatttcgatgctttcaatcagata
gaaggtggtcaacttgaggcggaccaagaggatgtgttagcataa
DBGET
integrated database retrieval system
