Brettanomyces nanus: FOA43_004501
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Entry
FOA43_004501 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K09291
nucleoprotein TPR
Organism
bnn
Brettanomyces nanus
Pathway
bnn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FOA43_004501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnn03019
]
FOA43_004501
Messenger RNA biogenesis [BR:
bnn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
FOA43_004501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
HMMR_N
Motif
Other DBs
NCBI-GeneID:
62197901
NCBI-ProteinID:
XP_038780663
UniProt:
A0A875S838
LinkDB
All DBs
Position
4:complement(2634097..2639460)
Genome browser
AA seq
1787 aa
AA seq
DB search
MDDQPQKTPFSEGKSPADDAADLSQTPPSTTSLVPTIEPEQAAPVEDVQTVEPVLSAVPQ
EQEDVQQTVQGSILLYPSPGLVSENHESTMVEEEETPEDTEQSVDASVLPIEASISREES
PASNESPESAGSPESLDVSPEPASEDYSALSSFYRIEEPTLHSLEPALFQALLSGFGEYQ
SLKSTSQILEVNLEQLKHSAQSKIVSVTTELHTAQEKIRHLDKDSLESSGDKLKYQQKLA
KAHEEMLKAQNIVSDLKQQIQQYSEEKKNAFEMLSNKQEQLVGSTQEIKALAESNKQLRN
QMSASETGKEELRSQVMTELLAKTKYQRELTLANQSSSWYENELSKKTSELQRLREEKRT
EVTDLRSRLDKAEQHSSVVTKSKETLSKSLKDLQVKFDNSLVKIKELSDKVSNQEHEYTE
ELSKKEQMLIILQNSSDDRKNRIDSLQKMYDETSQKVASDEASYKAQFEGLQADITKRES
KIKDLEETVNDLTSANINSGVDTSNILLGLNDGGGVSGADRSVTLTPSAQKVLRATDYSL
TDLVAEINQLRKALYREKRGRQKAEEELTTIFKELDRRMPLLKSYKEKCLSLEMKHGQFE
LMLDNLSKEKSMFRTQLSISSKKAEELQQQVVQLTQYKTDLQRQLATLLAEVTVKEQGDG
SSLTKEEKAYIGKLVAHEPELEDLTDTGKLISERLTTFKDIEDLIERNEQLLVVSRDLGT
ELERRESSGSAELGEAENEALEKSKDAILKLKEQLQNTKTQLEAVTNNRDMLQKLVENGQ
VAPGNENNSADGKALNERISRLVEQLRQKQQEYNDLKRQYDTKTFELNMKVQSLISEKSD
VSLELAKANSSINLIRERAKSSGYLSEATKAENEQLKKTSVRLQDRQSKLEMRVQQLDDA
LLESRSMQATLEVQVKSLSAEKVMWKNNDDRLREEMEKLSSEKSKANSLTVKLQILDAER
QSQFKGTLERLNNNIDRLQKQLDDVRAKLEASNEETKRILHSKNADARSYQARIDGLSEE
LKSAQEALLNKSHSVVEIGDHLEQLQKKYDSLNSKRTSGLVSLGADTSDDAVAALRQELN
RALEDSKLASQNAVQYKQIATASEKELNILNDTYSRYKVSTELRIAQGKEETSELQAQLE
ELSNAKSLLEERFQALSKQYSEEKNIADAKITELNAAVNAFDSIKADYEARIGSLNDDIT
SRAELLKRSEEKLKEKDVSVSEISSENEELKRQIISLQEKISQLDMDMKAAQSELETFTE
SWKSEKSNLEEQSRRDKMRVSEMDTQNRTLMNQLESSQFSFGDSNGLESDKDMKSLLGYL
HRENDSLSQQLEYSKSEEKKLRQSVSMNEKELSEVKIQLEEAKQRSLVADKYTTLLEKMK
QESQELSVYKENNQSLRDEVRSYSEKVQRLENEYNLTVSKIEPLQQQVAQLQSEAEARNK
QLEIAQSELNAMKTQLESKGGEKDENKKAEDEEKKALVLRVADLERQKSSATRNEEQLKL
YQTETLRLNNEVKSLKARIASLNEETEQKIEEIKKSAGKSEGPADKAREEFRKKVHVQEM
EVYKRKLQQETDAYKNQVALESEVFKKNIEAESKTRLQQEMEAYKKRVRAPSNARISEVI
EQRWKARSAELDAQYEAKVKEVEANNRESVGSGGITDDERKKMREELEKEKESVREEVTT
SVRKETQFRENILKRQLMALKQKVKELEGTPSTADMSTTSAIVSATAPEVVPIVFPATAP
ASLPSAPFSVPSAPASLPATPAPTTTPASKRPAESSSGNDDKRTKTE
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcagccccagaaaactcctttttctgagggaaagtcgcctgctgacgatgct
gcggacttgtcacagaccccaccttccactacatctcttgtacccactattgaacctgag
caagctgcgcccgtggaagacgtgcaaaccgtggaacctgttctttctgcggtgccacag
gaacaagaagatgttcagcaaactgttcaaggctcaattcttctttacccctctcctggt
ttagtctccgagaaccacgagagtacgatggtggaggaagaagagactccggaagacact
gaacaaagtgtagatgcatctgttttaccaattgaggcctctattagtcgtgaagagtct
cctgcgtccaatgaatcccctgaatctgcgggatcgcccgaatctcttgatgtttctcct
gagccagcatctgaagattactctgctttgtcttcgttctatcgaattgaagaacctacc
cttcattctttggaacctgcgcttttccaggcattattatcaggtttcggtgaataccag
tctttgaaatcaaccagtcaaatcctagaggttaatttggagcagctaaaacactctgca
caatccaaaatagtatctgttaccacagaactacatactgcccaagagaaaatccgccat
ctcgataaggattctcttgagtcatccggtgataagttgaagtaccagcaaaaattggcc
aaggcgcacgaagagatgcttaaagctcagaatattgtctcagatttgaagcaacagatc
caacagtattctgaagagaaaaaaaatgcatttgagatgctctctaacaagcaggagcaa
ctagttggatctacccaggaaatcaaggcattggctgaatccaacaagcagttgagaaat
caaatgagtgcttcggagactgggaaagaagagttgagatcacaggtgatgactgaactg
cttgcgaagaccaaataccagagagaacttacactcgctaatcaatcttccagttggtat
gagaatgaattgagcaagaagacttccgaattacagaggcttagggaagaaaagaggact
gaagtgacggatcttcgttctcgtttggataaagccgaacagcatagttcggttgtaacg
aaaagtaaagaaactcttagcaagtccctgaaagacttacaagtgaaatttgacaatagt
ttggtgaagatcaaagagttgagtgataaagtgtcgaatcaagagcatgaatatacggaa
gagttatcaaagaaagagcaaatgcttattattctgcaaaattctagtgacgacaggaag
aaccgtattgattcgctacagaaaatgtatgatgaaacctcgcagaaagttgccagcgat
gaggctagttataaagcacaatttgagggtcttcaagcagatatcacgaagcgtgagtct
aagattaaagatttggaggagactgttaacgatttgaccagtgcaaatataaattctggt
gttgacacaagcaacatcctactcggattaaatgatggaggcggtgttagtggcgctgat
agaagcgttaccttgactccatccgctcaaaaagtgttgagggcaaccgattattcactc
acggatcttgtggctgagatcaatcagctccgtaaggccttgtatagagaaaagagaggc
cgtcaaaaggccgaagaggaattgaccacgattttcaaagaattggatcgtagaatgccg
ttgttgaagtcttacaaggagaaatgtttgtcgttagaaatgaagcatggacagttcgag
ttaatgctagacaacttgtctaaggagaagtcaatgtttcgcacccagttgagcatatca
agtaagaaagctgaggaacttcagcagcaggtggttcaactcactcagtacaagactgat
cttcaaagacagcttgctacattattagctgaagtgacggtgaaggagcaaggggatggc
tcatccttgaccaaggaggagaaagcctacattggtaaattggttgctcacgagcctgaa
ctagaggatcttaccgatactggtaaactaattagtgagagacttacgactttcaaagat
attgaggatcttattgaaaggaatgagcagttattagtagtttcgagagatttgggtact
gaacttgaaagaagagaaagttctggatctgcagagctgggagaggctgagaatgaggcg
cttgaaaaatcaaaggacgccatcctcaaattaaaagagcaattgcagaacacaaagact
cagttggaagccgttacaaacaatagagatatgttacagaagcttgtcgagaatgggcag
gtggctcctggtaatgagaataacagcgcggacggtaaggctttgaatgagagaatcagc
cgactggttgagcagctgagacagaagcagcaggagtacaatgacttgaagaggcagtat
gatacgaagacatttgagttgaatatgaaggttcagagtcttatttctgagaagtcagat
gtctctcttgaattggcaaaggctaattcatcgattaatttgataagagagagagccaag
tcttcaggctatttgagcgaagccactaaagctgagaacgagcaattgaaaaagacctcg
gtcagattacaggatcgtcaatctaaacttgaaatgcgtgttcaacagttagatgatgcc
cttcttgaatctagaagcatgcaggccactctggaagttcaggtgaaaagtttgagtgct
gaaaaggtcatgtggaagaacaacgatgacagattgcgggaggagatggagaaactttca
agtgagaaatccaaggccaactcgttgactgtgaagttgcaaatattagatgccgaaagg
cagtctcaattcaaagggacccttgaaagacttaacaacaatatcgatagactccaaaag
caattggacgatgttagagccaaattggaggccagcaatgaagagacgaagcggatcctt
cactccaagaacgcagatgctcgaagctatcaggcgagaattgatggtctttcagaagag
ctgaagtctgcacaggaggctttgctaaataagtcgcattctgtggttgagataggcgat
catctggagcaattacagaagaagtatgatagtttgaatagtaagagaaccagtgggctc
gtttcgcttggagcggatacctctgatgatgctgttgctgctttaaggcaagaattgaac
cgtgcattagaggactctaagttggcctcgcagaatgctgttcagtacaagcagattgct
acagcttctgagaaagagctcaacattttaaacgacacgtacagcagatataaggtctcg
accgagctacggattgctcagggtaaagaggagacttccgaattgcaggcacaactcgag
gagttaagcaatgcgaagtcgctgcttgaagagcgattccaggctttgtcgaaacaatat
tctgaggagaagaatatagcagatgctaagattactgaattgaatgctgccgtgaatgct
tttgacagtattaaagcagactacgaagctaggatcggatctcttaatgatgatattact
tctcgagcagagttattaaaaagatcagaagagaaactcaaggagaaggatgtatcagtt
tctgagatttcttccgagaatgaggaattgaaacggcagatcatttcattgcaggaaaag
atttctcaattagatatggatatgaaggcagctcaatcggagcttgagacgtttactgag
agttggaaatccgagaaatcaaacctcgaggagcaatcaagaagggacaaaatgagagtt
tcggaaatggatactcagaatcggactctcatgaaccaattagagagctcgcagttctcg
tttggcgacagcaatggtctagagtctgataaggacatgaaaagtcttctgggctatttg
caccgcgagaatgattctctttcgcagcagttagaatattccaagtctgaagagaagaaa
ttgaggcagagtgttagtatgaatgaaaaagagctttctgaagtcaaaatacaacttgaa
gaagccaaacagagatctttggttgctgataagtatacaacattgcttgaaaagatgaag
caggaatctcaagagttatcagtttacaaggagaacaatcaatctcttagagatgaagtg
aggagttattctgagaaagttcaaagacttgagaatgagtataatttgacggtgtcaaag
attgaaccattacagcaacaggttgctcaacttcagtctgaggcagaggctagaaataag
caattagagattgcacagtctgaattgaatgcgatgaaaacacagttagagagcaaaggg
ggtgagaaagatgagaataagaaagccgaagacgaagagaagaaagcgttggtattgcgt
gtagcagacttagagaggcagaagagctccgctactcgaaatgaagagcaattgaagctt
taccagacagagacactcagattaaacaatgaggtgaagagtcttaaagccagaattgct
agcttgaatgaggaaacagagcaaaagattgaagagatcaagaagtctgcaggcaaaagt
gaaggtcctgcagataaagctagagaagaattcagaaagaaagttcatgttcaagaaatg
gaagtttataaaagaaagcttcagcaggaaacagatgcttataagaatcaggttgcattg
gaaagcgaggtgttcaagaagaatattgaagctgaaagcaagacacgtttgcagcaggag
atggaggcatataaaaaacgtgttcgtgcgccaagtaacgccagaataagcgaggtgatc
gaacaacggtggaaagcacgatctgcggagttggatgctcagtatgaagctaaagtgaag
gaggtggaggccaataatagagagagtgttggtagtggtggaatcactgacgatgaaagg
aaaaagatgcgtgaggaactggagaaggagaaggagagtgtgagagaagaggttactacc
tctgtgagaaaggagacgcagtttagggagaatatcttgaagagacagcttatggcactt
aaacaaaaggtgaaggaattagagggaacaccatcaacagccgacatgagtactacgtct
gcgattgtttcagcaactgctcctgaagttgtccctatcgttttccctgcaactgcccct
gcttcgcttccatctgctcctttttctgttccgtctgctcctgcatctcttccagctaca
cctgcccctactacaacgccggcctctaagcgtcctgcagaatcgtcatcgggaaatgac
gataaacgcaccaaaaccgaataa
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integrated database retrieval system