Brettanomyces nanus: FOA43_004625
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Entry
FOA43_004625 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
bnn
Brettanomyces nanus
Pathway
bnn03440
Homologous recombination
bnn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FOA43_004625
03450 Non-homologous end-joining
FOA43_004625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bnn03032
]
FOA43_004625
03400 DNA repair and recombination proteins [BR:
bnn03400
]
FOA43_004625
DNA replication proteins [BR:
bnn03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
FOA43_004625
DNA repair and recombination proteins [BR:
bnn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
FOA43_004625
BRCA1-C complex
FOA43_004625
NHEJ (non-homologous end-joining)
MRX complex
FOA43_004625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SbcC_Walker_B
AAA_21
Rad50_zn_hook
ABC_tran
AAA_29
AAA_13
AAA_22
Methyltransf_32
AAA_16
Motif
Other DBs
NCBI-GeneID:
62198025
NCBI-ProteinID:
XP_038780783
UniProt:
A0A875S8I0
LinkDB
All DBs
Position
4:complement(2904102..2907980)
Genome browser
AA seq
1292 aa
AA seq
DB search
MSSIYKLSISGIRSFSDESQETIQFGKPLTLIVGTNGSGKTTVIECLRYATSGELPPNTK
NGSSFINDPSLHSANETKAQIKLAFQNVNKVSMILSKSLMASRNPKSHNISFKTRENQLM
AIRNGERQTISSKVADIEPLIPQQLGVSKAVLIYVIFCHQDDNGWPISDSATLKKRFDEI
FDSVKFIKVLEEMKAATKELNIQIKVLTNDVSHLENDKIRAKQKRAHLSSLTFQIQSLED
EMVQLKMLIDEDDAKLSDLYNTKQDYERTLSQLESLKQQQNSTKQHIDRIRTTSKILNEP
REVLQDRLNDFTNFMAVKRQKVDHLQEEIHVRNVDIDSKRAQYDEAMFEHGKLEGIFDKY
QSNRERLRMLFDKYDFIDITDLNGSVAKLNAQYKSEKSEMIERLDDYDFQLVTVKEEITK
EEQHCHYIKTDISNLKDNEKDMQKRLSGLGDNTTKLESAKGYLIENEEKLDDKRKNNGIS
ETLRQIEGCNTTIKRCEVEIDDIQRKMNIARKNEEIHSKYNVLVEMNLKCMRSKDTAVKK
LKNLLSTENDPQAEFLIQVNNLATERKACQTKLEDLKMKRAQLNSNLSRSQELRFQASEE
LKRLEAGFYEISNKYMACYGEELKSDEFDDVLLEVENDYSNDFTTMKNHESYVTFNKRAI
ELAKAKNACLLCHREFQGQEQSQFFKLLGEQNKKLNDSEEASNLLKQKEEVLKMMRNASK
DVAKVKSLKDDNMDKDVVRYGNELKEVSSVIETENESLGNIMDQQEKMKSWESDVMHIRH
WNEETDERKRQIDRLNQELIDDGSSGEYKELEERYREYSEEMRKARSNLESYRAEKELKL
TELNRIEASVSDLKLKIKSLELISMDKINIEKSVEETKKQIVSLESSLGESKARCKILQA
SYDKSKREMDGYKNEVKVKVGSLENQLNEKKEIRNEVVNIDNAIKEYENTYAYKLEECKK
RIQVYKSSIAAIEPEISELESQREELEKQISDASGEERTITYNIELISLENELINIEEDI
GKLDVKKAEAERETYVTQSRHLQEQQMEHRRQYATKVGEKTQIQKQTESIVQEMNRDYKD
VDKKYGEQYAKLQTKLALVTDLGTCYKATDDGVMMFHQQKMMEINRIIDELWKTTYTGND
VESIMIKADPISAGKPRTGSIRSHKSYNYRVVMIKNGVELDMRGRCSAGQRVLASIIIRL
ALAECFGLNFGMIALDEPTTNLDEENVESLAKALNKIIEMRSVQRNFQLIVITHDEKFLR
YMNAVSFTDHYYRIARNERLHSTISKVRITSL
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccatctacaagctttccatctctggtatccgttctttctctgatgaatcccag
gaaactatccagttcggcaagcctctcaccctcattgttggtactaacggctctggaaaa
actacggtcatcgaatgccttagatacgccacttctggtgaacttccaccaaacactaaa
aacggatcttctttcatcaatgatccgtctctacactctgccaatgaaactaaagcacag
atcaaattggctttccagaatgtcaataaggttagtatgattctctctaagtctctcatg
gcatcaaggaatccgaagtctcataacatcagcttcaaaactcgagagaaccagttgatg
gccatcagaaacggagaaagacagacaatcagctccaaagttgctgatatcgaacctctt
attccccaacagcttggtgtatcaaaggctgtgcttatttacgttatattctgccatcag
gacgataatggatggcccataagtgactctgcaacgttgaaaaaacgatttgatgaaata
ttcgattccgtaaagtttatcaaagttcttgaagagatgaaggctgctactaaagagctc
aatatacagataaaagtgcttacaaacgacgtctctcacttggaaaatgacaagattagg
gccaagcaaaaacgtgctcatctatcgagtttaacttttcaaattcaatctctggaagat
gagatggttcagcttaaaatgcttattgacgaggatgatgctaagttatctgatttatac
aatactaagcaagactacgaacgaactcttagtcaacttgagtctttaaaacaacagcaa
aacagcactaagcagcacatcgatcgaattagaacgacaagcaagattcttaatgaaccc
agagaagtattacaagatagattgaacgatttcaccaattttatggcagttaagaggcag
aaggtggatcacttacaggaggagattcatgtgaggaatgttgatatcgactctaagaga
gctcaatacgatgaagcgatgtttgaacatggaaaattggaaggaatatttgataagtat
cagagtaatagggaaaggctcaggatgttgttcgataagtatgattttatcgatatcact
gatttaaatggttcagtagccaaactcaatgctcaatataaatccgaaaagagtgagatg
atagagagattagatgactatgacttccagttggttacggtgaaagaagaaattaccaaa
gaagaacagcattgtcattacatcaaaacagatatttcaaatttgaaggataatgagaaa
gacatgcagaaaaggcttagtggacttggagacaatactacaaaattggagagtgctaag
ggatatcttatagaaaacgaagagaaacttgatgataagaggaagaataatggcatatct
gaaacgttgcggcaaattgaaggatgcaatactacaatcaaaagatgtgaggttgaaatc
gatgatattcaacgaaagatgaacattgcaaggaaaaatgaagaaattcactctaagtac
aatgttcttgttgagatgaacttgaagtgtatgagatcaaaagatactgcggtgaagaaa
ttgaagaatttgctatctacagaaaacgaccctcaagctgagtttctcattcaagttaac
aacttagccacagagaggaaagcttgccagacaaagctggaagacttgaagatgaaacga
gcccaactcaattcaaatttgagccggagtcaagaattacgctttcaagcctctgaagag
ttgaaacggctagaggccggtttttacgaaatctctaataagtatatggcatgttatgga
gaggaattgaagagtgatgaatttgatgatgtgttgttagaggtagaaaatgattatagt
aatgatttcacaacaatgaagaatcatgagtcgtatgtgacgttcaataaacgagccatt
gagcttgccaaagctaagaatgcatgtcttctttgtcatagagagtttcaaggtcaggag
cagtcgcagtttttcaaacttttaggggagcagaataagaagttgaacgatagtgaagag
gcaagtaacttgcttaaacaaaaagaagaagtcttaaagatgatgaggaatgcgagtaag
gatgttgcaaaggttaagtcgctgaaagatgacaatatggacaaagatgtagtacgttat
ggaaatgagcttaaagaggtgagctctgtgattgagacggagaatgaaagcctcgggaat
attatggatcagcaggaaaagatgaaaagctgggaatctgacgttatgcatattcgtcac
tggaatgaggaaactgatgaaagaaagaggcagattgacagactgaatcaagaactgatt
gatgatggctcgtctggcgaatacaaggagttggaagaacgttatagggagtattccgaa
gagatgaggaaagcgcggagtaatttagagagttacagagctgagaaggaattgaaattg
actgaattgaatagaattgaagcatcagtaagtgacttgaagcttaaaattaagagttta
gagctgatatcgatggataagatcaacattgaaaagtctgttgaggaaactaagaagcag
attgtttctttagagagttcgcttggggagagtaaagccaggtgtaagatactgcaggcg
agttacgataagagcaagcgagagatggatggatacaagaatgaggtgaaggttaaggtt
ggttccttagaaaaccaattgaatgagaaaaaggagatcagaaatgaggtggtcaatatt
gataatgctatcaaggaatatgagaatacatatgcatataagcttgaagagtgtaagaag
cggatacaggtttataaaagcagtattgccgcaattgagcctgagatttctgaattggaa
agtcaaagagaggagttggagaagcagataagtgatgctagtggtgaggaaaggactatt
acatacaacatcgagcttatttccttggagaatgagttgataaatattgaagaagacatt
ggtaagcttgatgtgaaaaaggcagaggctgaaagagagacatatgttacgcaaagccga
catttacaagagcagcagatggaacatagacggcagtatgccacgaaggtgggagagaag
actcagatccagaagcagacagagtccattgtgcaagagatgaatagagattacaaagac
gtggacaagaagtacggagaacaatatgctaagctacaaacgaaacttgcattggtcaca
gatttgggaacatgttacaaggccactgatgatggtgttatgatgttccaccagcagaag
atgatggagatcaaccgaatcatagacgagttatggaagacaacttatacaggtaatgat
gtggagtcgattatgattaaggccgatccaatttccgcaggtaagccacgtacaggttcg
atcagatcacataaatcgtataattatcgtgtggtgatgattaaaaatggcgtggagtta
gatatgcgcggtagatgctctgcgggacagagggttttggcttctatcatcatacgtttg
gcacttgcagagtgctttggactcaactttggtatgatcgcattggatgaacccactaca
aacttggacgaggagaatgtggagagtctagccaaggcattgaataagattatcgaaatg
aggtccgttcaaaggaatttccagttaattgtgattacccacgatgagaagtttttacgg
tatatgaatgcagtgtcattcacagatcattattatagaattgctagaaatgagagacta
cattcgacgatcagtaaggtgagaatcacttcactataa
DBGET
integrated database retrieval system
