Bacteroides nordii: K8P02_00205
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Entry
K8P02_00205 CDS
T07941
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bno
Bacteroides nordii
Pathway
bno03030
DNA replication
bno03430
Mismatch repair
bno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K8P02_00205 (dnaE)
03430 Mismatch repair
K8P02_00205 (dnaE)
03440 Homologous recombination
K8P02_00205 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bno03032
]
K8P02_00205 (dnaE)
03400 DNA repair and recombination proteins [BR:
bno03400
]
K8P02_00205 (dnaE)
Enzymes [BR:
bno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K8P02_00205 (dnaE)
DNA replication proteins [BR:
bno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K8P02_00205 (dnaE)
DNA repair and recombination proteins [BR:
bno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K8P02_00205 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
DUF6282
Motif
Other DBs
NCBI-ProteinID:
UAK44830
LinkDB
All DBs
Position
63056..66850
Genome browser
AA seq
1264 aa
AA seq
DB search
MQDFVHLHVHTQYSLLDGQASVSALVDKAMKNGMKGIAVTDHGNMFGIKEFTNYVNKKNG
GPKGEIKDQKKRISAIESGKVECEDKEAEIAICKAKIAEAEAKLFKPIIGCEMYVARRTM
DKKEGKPDQSGYHLIVLAKNEKGYHNLIKLVSHAWTDGYYMRPRTDRNELEKYHEGLIVC
SACLGGEVPKKITQGLLDEAEEAIQWYKNLFGEDYYLELQRHKATVPRANHEAYPLQVNV
NSHLIEYSKKYNVKLICSNDVHFVEEAHAEAHDRLICLSTGKDLDDPKRMLYTKQEWMKT
REEMNELFADVPEALSNTLEILDKVEYYSIDHPPIMPTFAIPEEFGTEEGYRQKYTEKDL
FDEFTQDENGNVVLSEDAALDKIKRLGGYDKLYRIKLEADYLKKLTFDGAKKFYGEPLSP
EIKERLVFELHIMKTMGFPGYFLIVQDFIAAGRNMGVSIGPGRGSAAGSAVAYCLQITKI
DPIRYDLLFERFLNPDRISLPDIDIDFDDDGRGEVLRWVTEKYGHEKVAHIITYGTMATK
LAIKDVARVQKLPLSESDRLAKLVPDKIPEKKLNLRNAIDYVPELQAAEASPDPLVRDTL
KYALMLEGNVRGTGVHACGTIICRDDITDWVPVSTADDKETGEKMLVTQYEGSVIEDTGL
IKMDFLGLKTLSIIKEAVENIRLSKNIELDIDTISIEDPATYKLYSDGRTIGTFQFESAG
MQKYLRELQPSTFEDLIAMNALYRPGPMDYIPDFIDRKHGRKPIEYDIPVMEKYLKDTYG
ITVYQEQVMLLSRLLADFTRGESDALRKAMGKKLRDKLDHMKPKFIEGGRKNGHDPKVLE
KIWTDWEKFASYAFNKSHATCYSWVAYQTAYLKANYPSEYMAAVMSRSLSNITDITKLMD
ECKAMGIQVLGPDVNESNLKFTVNRHGDIRFGLGAVKGVGESAVQSIVEERRANGPFKGI
FDFVQRVNLNACNKKNMECLALSGGFDSFPELKREQFFAVNSKGEVFLETLMRYGNRYQA
DKAAAVNSLFGGENVIDIATPEILPAERWGDLERLNRERDLVGIYLSAHPLDEYTIVLDH
VCNTRMAELEDKSALVGREITMGGIVTSVRRGISKNGNPYGIAKIEDYSGSAELPFFGND
WVTFQGYLGEGTFLFIKARCQPKQWRPEELDIKITSMELLPDVKEKLVEKITILVPLSVL
NSAMVAELSSLTKDHPGNTELYFKVTDRDEKMHVDLISRPVKLSVGKELISYLKERPELE
FRIN
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatttcgttcacttacatgttcatacccaatattctctattagatggtcaggcc
agcgttagtgctttggtagataaagccatgaaaaatgggatgaagggaattgccgtaacc
gatcatggaaatatgttcggtatcaaggagtttactaattatgtcaataagaaaaatggt
ggaccgaagggggagataaaggatcagaaaaaacgtatttccgctattgaatccggtaaa
gtggaatgtgaagacaaggaggccgaaatagcgatctgtaaagctaaaatagctgaagct
gaggccaaactgtttaagcccatcattggttgtgagatgtatgtggcccgtcgcacgatg
gataaaaaagagggaaagccggatcagagtggttaccacctgatagtattggcaaagaat
gaaaagggctatcataaccttattaagttggtatcgcatgcatggactgacggatattat
atgcgtccacgtaccgaccggaatgagttggagaaatatcacgaaggtttgattgtctgt
tcggcctgtttgggtggggaggtgcctaaaaagataacacaaggtctgttggatgaagct
gaggaagccatccaatggtacaagaacctttttggagaagattattatctggagcttcaa
cgccataaggctactgtccctcgcgccaatcatgaagcgtatccattgcaggtgaatgta
aacagtcatctcatcgaatattctaaaaaatataatgtgaagctgatctgctctaacgat
gttcactttgtggaggaagcacatgcagaggcacatgaccgtcttatttgtttgagtacg
ggtaaagatctggatgatccgaagcgtatgctttataccaagcaagagtggatgaaaacg
cgtgaagagatgaatgagctctttgccgatgtgcctgaggctttgagtaatacgcttgag
attcttgataaagtagagtattattcaatagatcatcctcctattatgccgacttttgcc
attcccgaagagttcggaacagaagaaggatatcggcagaaatatacagagaaagatctt
ttcgatgaatttacgcaggacgaaaatggaaatgtagtgctgagtgaagacgcagcactg
gataaaataaagcgattggggggatacgacaaattatatcgtatcaaactggaagcggat
tatctgaagaagctaacatttgacggagcaaagaaattctatggagaaccgttaagtccg
gagataaaagagcggctcgtgtttgagttacatattatgaagacgatgggttttccgggt
tacttcctgattgtacaggactttattgcagcgggacgtaatatgggagtttctattggt
ccgggacgtggatcggctgccggttcggctgtagcatattgtttgcagataacgaagatt
gacccgatccggtatgacttgctgtttgagcgttttctgaatccggatcgtatttcactg
ccggatattgatattgactttgatgatgacggtcgtggagaagtacttcgttgggtaaca
gaaaagtatgggcatgagaaggtggcacatatcattacatacggtacgatggccacaaag
ttggctattaaagatgtagcgcgcgtacagaaacttcctttgtccgaatcggaccgtctg
gcaaagctcgttcccgataaaatccctgaaaagaaattaaacttgcgcaatgccatcgat
tatgtacccgaactgcaagcagccgaggcgtcgcctgatccgttggtgcgtgataccttg
aagtatgccttaatgctggagggtaacgtgcgcggtacgggagtacatgcttgtggtacg
atcatctgtcgtgatgatatcaccgattgggtaccggtaagcaccgcggatgataaggaa
acgggcgagaagatgctcgtaacccagtatgaaggttcggtgattgaagataccggattg
attaagatggacttcctgggcttgaagactttgtctatcattaaggaagctgttgagaat
atccgtttaagtaagaatattgaactggatattgatacgatttctatagaggatcctgct
acttataaattatatagtgacggacgaaccatcggtacgttccagtttgaatctgcgggt
atgcagaaatatctgcgtgagctgcagccttctacttttgaggacctgattgccatgaat
gctctttatcgtccgggtcctatggattatattcctgattttattgatcgtaaacacgga
cgtaaaccgattgagtatgacattcctgtgatggagaaatacctgaaggatacttatggt
attactgtgtatcaggaacaggtgatgctcttgtctcgtttgctggccgactttacccgc
ggtgaatccgatgccttgcgtaaagcgatgggtaaaaagttacgtgataagctggatcat
atgaaaccgaagttcattgaaggcggacggaaaaacggacatgacccgaaagtccttgag
aagatttggaccgactgggaaaagtttgcttcgtatgcgtttaataaatcgcatgctact
tgttactcatgggtggcgtatcagacagcttatctgaaagcgaactatccttcggaatat
atggctgccgttatgagtcgaagtttgtctaacattactgatatcacaaagctgatggat
gagtgtaaggcgatgggaatacaggtacttggtccggatgtaaatgaaagtaaccttaaa
tttacggtaaacaggcatggtgatattcgctttggattgggagctgtgaaaggagtaggg
gagtctgcagtacaaagtatagtggaagagcgtcgggcgaatggcccgtttaaggggatt
ttcgattttgtgcagcgtgtcaatctgaatgcttgcaataagaagaatatggaatgcctg
gcactttcgggtggttttgatagtttccctgaactgaaacgtgaacagttctttgctgta
aattcgaaaggagaagtgttccttgaaacgctgatgcgctacggtaaccgttatcaggca
gataaagctgccgcggtgaattcattgtttggtggagaaaatgtgattgatatcgctact
cctgagattcttcctgccgaacgttggggagatctggagcgactgaatagagaaagagat
ttggtaggaatttatctttctgcacatccgttggatgaatatactatcgtacttgaccat
gtctgcaatacgcgtatggctgagcttgaagacaagtctgcgctcgtcggccgggagata
acaatgggaggaatagtgaccagtgtgcgtcgggggatcagtaagaatggtaatccatat
ggtattgccaagatagaagattactccggttcggcagagttaccgttttttggtaacgac
tgggttactttccaaggctatctgggagagggaactttcttgttcattaaagcccgttgc
caacccaaacaatggcgtcccgaagaattggatatcaaaatcacttccatggaattgctt
cctgatgtgaaggagaaactggttgaaaagataacaatccttgtaccgttgtctgtcttg
aattcggccatggttgccgaattgtcttcattgacaaaagaccatcccgggaataccgag
ctctattttaaagtgacggacagggatgaaaagatgcatgttgatttgatatcccgtccg
gtaaaactatctgtagggaaagaattaatctcttatttaaaagaacgacccgaacttgag
tttcggataaattaa
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integrated database retrieval system
