Bacteroides nordii: K8P02_02435
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Entry
K8P02_02435 CDS
T07941
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bno
Bacteroides nordii
Pathway
bno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K8P02_02435 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bno03019
]
K8P02_02435 (rny)
Messenger RNA biogenesis [BR:
bno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K8P02_02435 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
DUF2570
Cas3_HD
DUF641
Motif
Other DBs
NCBI-ProteinID:
UAK43174
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All DBs
Position
complement(654869..656404)
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AA seq
511 aa
AA seq
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MLVTIVASIACFIVGGILSYVLFRYGLKAKYDNVLKEAETEAEVIKKNKLLEVKEKFLNK
KADLEKEVAQRNQKIQQAENKLKQREMVLSQRQEEIQRKKAEADAVRENLEAQLGIVDKK
KEELDKLQHQEIEKLEALSGLSAEEAKERLVESLKEEAKTQAQSYINDIMDDAKLTASKE
AKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVSKVRKQVEEEIIETGKRTTID
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
IGKVPDEEPELPHALLGMKLAEKFKEKPDICNAIGAHHDETEMTSLLAPIVQVCDAISGA
RPGARREIVEAYIKRLNDLEQLAMAYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgttagtaacaatagtagcatccattgcttgcttcatcgtaggtggcatattgtcatac
gtattattccgatacggactaaaggccaaatacgataacgtcttgaaagaggcggaaacc
gaagcggaagtgataaagaaaaacaaattgctggaagttaaggagaaattcctcaacaaa
aaagcagatctggaaaaagaagtagcgcaacgtaatcaaaagattcagcaggctgaaaat
aaattgaaacagcgcgaaatggtattgagccagcgtcaggaagagattcagcgcaagaaa
gcagaagctgacgccgtaagagaaaatctggaagcccaactgggaattgttgataagaag
aaagaagaactggacaaactgcaacatcaggagatagaaaagctggaagcactttccggt
ttgtctgccgaagaagcaaaagaacgcttggtagaatctttgaaagaagaggccaaaaca
caggcgcagtcctacatcaatgatatcatggacgatgccaagctgacagccagtaaagaa
gcaaaacgcattgtgatacagtctattcaaagggtagctacggaaacagccattgagaac
tctgtaaccgtattccacattgaatctgacgaaatcaaaggacgtattatcggtcgtgaa
ggacgtaatatccgtgcactggaagctgctacaggtgtagaaatcgtagtagatgacact
ccggaagcaatcgttctttctgcatttgaccccgtacgtcgtgagatagcccgtctggct
ttgcaccagttggtaaccgacggacgtatccaccctgcacgtattgaagaggtagtatcc
aaagtacgcaaacaggttgaagaagaaatcatcgaaaccggtaaacgtaccactattgac
ctcggtatccacggattacatccggaattgatccgtatcatcggtaagatgaaataccgc
tcttcttatggtcagaacttgctgcaacacgctcgcgaaactgcgaatctctgtgctgta
atggcatcggaactgggcttgaaccctaaaaaagcaaaacgtgccggattgttgcacgat
attggtaaagtgcctgatgaagaaccagaattgccgcacgcattacttggtatgaagtta
gccgagaaattcaaagagaaaccggatatctgcaatgctatcggtgctcaccatgacgaa
acggaaatgacaagcttgctcgctccgatcgtacaggtatgtgatgctatctccggtgca
cgtccgggagcacgccgcgaaatagtagaagcgtatatcaaacgtctcaacgacctggag
caattggctatggcttatccgggagtaacaaagacttatgccatccaggcgggacgcgaa
ctccgcgttatcgtaggtgcagataagattgacgataagcaaacagaaagcctgtcgggt
gaaattgcgaagaagatacaggatgagatgacttatccaggacaggtgaagattaccgta
atccgtgaaacacgtgcggttagctttgctaaataa
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