KEGG   Bacteroides nordii: K8P02_02435
Entry
K8P02_02435       CDS       T07941                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
bno  Bacteroides nordii
Pathway
bno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K8P02_02435 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bno03019]
    K8P02_02435 (rny)
Messenger RNA biogenesis [BR:bno03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     K8P02_02435 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH KH_2 DUF2570 Cas3_HD DUF641
Other DBs
NCBI-ProteinID: UAK43174
LinkDB
Position
complement(654869..656404)
AA seq 511 aa
MLVTIVASIACFIVGGILSYVLFRYGLKAKYDNVLKEAETEAEVIKKNKLLEVKEKFLNK
KADLEKEVAQRNQKIQQAENKLKQREMVLSQRQEEIQRKKAEADAVRENLEAQLGIVDKK
KEELDKLQHQEIEKLEALSGLSAEEAKERLVESLKEEAKTQAQSYINDIMDDAKLTASKE
AKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVSKVRKQVEEEIIETGKRTTID
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
IGKVPDEEPELPHALLGMKLAEKFKEKPDICNAIGAHHDETEMTSLLAPIVQVCDAISGA
RPGARREIVEAYIKRLNDLEQLAMAYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgttagtaacaatagtagcatccattgcttgcttcatcgtaggtggcatattgtcatac
gtattattccgatacggactaaaggccaaatacgataacgtcttgaaagaggcggaaacc
gaagcggaagtgataaagaaaaacaaattgctggaagttaaggagaaattcctcaacaaa
aaagcagatctggaaaaagaagtagcgcaacgtaatcaaaagattcagcaggctgaaaat
aaattgaaacagcgcgaaatggtattgagccagcgtcaggaagagattcagcgcaagaaa
gcagaagctgacgccgtaagagaaaatctggaagcccaactgggaattgttgataagaag
aaagaagaactggacaaactgcaacatcaggagatagaaaagctggaagcactttccggt
ttgtctgccgaagaagcaaaagaacgcttggtagaatctttgaaagaagaggccaaaaca
caggcgcagtcctacatcaatgatatcatggacgatgccaagctgacagccagtaaagaa
gcaaaacgcattgtgatacagtctattcaaagggtagctacggaaacagccattgagaac
tctgtaaccgtattccacattgaatctgacgaaatcaaaggacgtattatcggtcgtgaa
ggacgtaatatccgtgcactggaagctgctacaggtgtagaaatcgtagtagatgacact
ccggaagcaatcgttctttctgcatttgaccccgtacgtcgtgagatagcccgtctggct
ttgcaccagttggtaaccgacggacgtatccaccctgcacgtattgaagaggtagtatcc
aaagtacgcaaacaggttgaagaagaaatcatcgaaaccggtaaacgtaccactattgac
ctcggtatccacggattacatccggaattgatccgtatcatcggtaagatgaaataccgc
tcttcttatggtcagaacttgctgcaacacgctcgcgaaactgcgaatctctgtgctgta
atggcatcggaactgggcttgaaccctaaaaaagcaaaacgtgccggattgttgcacgat
attggtaaagtgcctgatgaagaaccagaattgccgcacgcattacttggtatgaagtta
gccgagaaattcaaagagaaaccggatatctgcaatgctatcggtgctcaccatgacgaa
acggaaatgacaagcttgctcgctccgatcgtacaggtatgtgatgctatctccggtgca
cgtccgggagcacgccgcgaaatagtagaagcgtatatcaaacgtctcaacgacctggag
caattggctatggcttatccgggagtaacaaagacttatgccatccaggcgggacgcgaa
ctccgcgttatcgtaggtgcagataagattgacgataagcaaacagaaagcctgtcgggt
gaaattgcgaagaagatacaggatgagatgacttatccaggacaggtgaagattaccgta
atccgtgaaacacgtgcggttagctttgctaaataa

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