KEGG   Bacteroides nordii: K8P02_04810
Entry
K8P02_04810       CDS       T07941                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
bno  Bacteroides nordii
Pathway
bno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K8P02_04810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bno03019]
    K8P02_04810
Enzymes [BR:bno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     K8P02_04810
Messenger RNA biogenesis [BR:bno03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     K8P02_04810
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 P-loop_SecA Phage_integrase Utp25_C CMS1 SUa-2TM
Other DBs
NCBI-ProteinID: UAK43619
LinkDB
Position
complement(1274537..1275805)
AA seq 422 aa
MTFENLNMIEPILKALKEEGYSSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPIL
QKLYKTDHRKGIKALILTPTRELAIQIGECFEAYGKYTGLKHTVIFGGVGQKPQTDALRN
GVQILVATPGRLLDLITQGYISLKTLDFFVLDEADRMLDMGFIHDIRRILKLLPQKRQTL
FFSATMPPEIETLANSMLTHPEKVEVTPASSTVDTISQYVYFVEKKEKKDLLLHLLKDQS
IESVLIFTRTKHGADKLARILTKSGIRAEAIHGNKSQNARQRALTDFKNHTLRVLIATDI
AARGIDVDQLSHVINYELPNVPETYVHRIGRTGRAGHDGIAISFCESEELPYLKDIQKLI
GKTIPVVKDHPFVTTEGAKAQEVKTEELKAKAKENKVYRGSRSNGDFWRRKKQAQRGEQQ
KK
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgacatttgaaaatttaaacatgatagagcccatactcaaggctctgaaagaagagggt
tattcctctcccactcccatacaagaacagtcaatccccattttacttcaaggaaaagat
ttattaggatgtgcacagaccggaacaggaaaaacagctgctttttctatccccattttg
cagaaactatataaaaccgaccaccgcaaaggaataaaagcattgatattaaccccaacc
cgggagttggccattcaaattggtgaatgttttgaggcatatggcaaatacaccggactg
aagcacactgttatctttggcggagtgggtcagaaacctcagacggacgcattgcgcaat
ggtgtacagatactggttgccacaccgggacgcttgctggacttgataacccaaggttat
atatcgctcaaaacactggacttcttcgtactggatgaggccgaccgcatgctcgacatg
ggctttatccatgatatcagacggatactgaaactccttccccagaagcgccagacgctt
ttcttctcggctactatgccgccggagatagagacactggccaactcaatgctgacccat
ccggaaaaggtagaggtgacaccggcttcttctactgtggacacaatttcgcaatacgtc
tactttgtagagaagaaggaaaagaaggacttattattgcacttactgaaagaccagtcg
attgaatcggtgttgatcttcacacgtaccaaacatggagccgacaaactggcacgcata
ttgaccaaatcgggtatacgtgctgaggctatacatggcaacaaatcgcagaatgcacgc
cagcgtgccctgacggatttcaaaaatcatactttgcgcgtattgattgcaacggacatt
gctgcacgtggtatcgatgtagatcagttgtcacacgtcatcaactacgaactacccaat
gtgccggagacgtatgtacaccgcattggacgcacaggacgtgccggacatgatggaatt
gcgatctccttctgcgaatcggaagaattaccttacctcaaagatattcagaagctgatc
gggaaaacaatcccagtagtcaaagaccatccgtttgtcaccaccgaaggcgccaaggcg
caggaggtgaaaacggaagaactcaaagcgaaagcaaaagagaataaagtataccgtggc
agccgctccaatggagacttctggaggcgaaaaaaacaggcacaaagaggagaacaacag
aagaaataa

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