Bacteroides nordii: K8P02_05960
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Entry
K8P02_05960 CDS
T07941
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bno
Bacteroides nordii
Pathway
bno02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bno00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K8P02_05960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bno03021
]
K8P02_05960
Transcription machinery [BR:
bno03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K8P02_05960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
Sigma70_r2
GerE
HTH_24
HTH_20
HTH_30
HTH_10
UPF0122
HTH_38
HTH_11
HTH_23
HTH_40
Xre-like-HTH
TnsD
MarR
LuxS
Motif
Other DBs
NCBI-ProteinID:
UAK43829
LinkDB
All DBs
Position
1544626..1545225
Genome browser
AA seq
199 aa
AA seq
DB search
MNPYHIETELLIQLRNGEHNAFRRLFDLYYALMCAIAYEYIEDEYICQGIAEDVLLSVWE
KRKQLDINISLKGYLIRSVRNRSIDYLRSNVQETKVVRMSTIDEYETCFIADEELFDKIA
LLELEDKIEEIVSTLPVECRTVFQMSRFEGLSNQEIAERLNISINTVKYHIKKALSVLKE
GLGDYLFAIVVAFVFLFRH
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttatcatatagaaaccgaattacttattcaattaaggaatggagaacacaat
gcttttcgccgtttgttcgatctctattatgcattgatgtgtgctattgcctatgaatat
atagaggatgaatatatatgccagggtatagccgaggatgtattgctatcggtatgggaa
aaacgaaaacaattggatattaatatttcgttgaaagggtatttaatccgttcggttcgt
aacaggagtattgattatttgcgtagtaatgtgcaggaaaccaaggttgtgcgcatgagt
actattgatgaatatgagacttgttttattgctgacgaagagttgtttgataaaatagct
ttattggaactggaggataaaatagaagagatagtgtcaaccttacctgttgaatgccgg
actgtattccaaatgagccggtttgaaggactttctaatcaggaaatagcagaacgtctg
aatatctctatcaatacagttaaatatcatattaaaaaggccttgtctgtactgaaagaa
gggcttggtgactatctttttgctattgttgtggcatttgtctttttgtttagacactaa
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