Bacteroides nordii: K8P02_07265
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Entry
K8P02_07265 CDS
T07941
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bno
Bacteroides nordii
Brite
KEGG Orthology (KO) [BR:
bno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bno03009
]
K8P02_07265 (rimO)
Enzymes [BR:
bno01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K8P02_07265 (rimO)
Ribosome biogenesis [BR:
bno03009
]
Prokaryotic type
ribosomal protein modification factors
K8P02_07265 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UAK44061
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Position
1886786..1888084
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AA seq
432 aa
AA seq
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MKRKTIDIITLGCSKNLVDSEQLMRQLNEAGYNVTHDSEKPEGEIAVINTCGFIGDAKEE
SINMILDFAQEKEEGNLEKLFVMGCLSERYLKELAIEIPQVDKFYGKFNWKELLKDLGKA
YHDELHIERTLTTPGHYAYLKISEGCDRKCSYCAIPIITGHHVSRPIEEILDEVKYLVSQ
GVKEFQVIAQELTYYGIDLYKKQMLPELIERISDIPGVEWIRLHYAYPAHFPTDLFRVMR
ERDNVCKYMDIALQHISDNMLEHMRRHVTKEDTYRLIEQFRKEVPGIHLRTTLMVGHPGE
TEADFEELKEFVRKARFDRMGAFVYSEEEGTYAAEHYEDSVSAEEKQARLDELMDIQQGI
SSELSAAKVGKQLKVIIDRIEGDYYIGRTEFDSPEVDPEVLINRADQTLLIGHFYQIEVI
DSDDFDLFGKII
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaagactatagatattataaccttagggtgttctaaaaatttggtagattca
gaacagttgatgcgtcaactgaacgaagctggatataacgttactcatgattctgagaaa
cctgaaggagaaattgcagtaataaatacctgtggctttataggtgatgcaaaagaggag
tctattaatatgattcttgattttgctcaggagaaggaagaagggaatctggagaaatta
ttcgtgatgggatgtttgtcggaacgatacttaaaagaactggcaatcgaaattccccag
gttgataaattttatggaaagtttaattggaaagaactgctgaaagatctgggtaaagcc
tatcacgatgaattacacattgaacgaacattaactactcccggtcattatgcttatctg
aaaatctcggaagggtgtgaccgcaaatgctcgtattgtgctattcctataataacagga
caccatgtgtcacggccgattgaagaaatactggatgaggtgaaatatcttgtgtctcag
ggcgtgaaagagtttcaggttatagcacaagagcttacttattacggaattgacttgtat
aagaaacaaatgcttccggaattgatagaacgtatttctgatattcctggggtagaatgg
attcgtctgcattatgcttatccagctcatttccctacagatctttttcgtgtaatgcgt
gagcgtgataatgtatgtaaatatatggatatcgctttgcagcatattagtgataatatg
ttggagcatatgcgtaggcatgtaacaaaggaggatacttatcggttaatagaacagttt
cgtaaagaagttcccggtattcatttgcgcactaccctgatggtagggcatccgggagaa
acggaggctgattttgaagaattgaaagagttcgttcgtaaggcacgttttgacagaatg
ggagcttttgtatattcagaagaggaggggacttatgctgccgagcattatgaagattct
gtttctgcagaagaaaagcaagctcgtttggatgaattgatggatattcagcaagggata
tcatctgagttaagtgctgcgaaagtgggtaagcaactaaaagtaattattgatcgtatt
gagggagattattatattggacgtacggagttcgattctccggaagtggatccggaagtt
ttgattaatcgtgcggaccaaacgcttctgattggtcacttttatcagatagaggtgatt
gattctgatgattttgatctttttggaaagattatttaa
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