Bacteroides nordii: K8P02_07400
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Entry
K8P02_07400 CDS
T07941
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bno
Bacteroides nordii
Pathway
bno03030
DNA replication
bno03430
Mismatch repair
bno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K8P02_07400 (holA)
03430 Mismatch repair
K8P02_07400 (holA)
03440 Homologous recombination
K8P02_07400 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bno03032
]
K8P02_07400 (holA)
03400 DNA repair and recombination proteins [BR:
bno03400
]
K8P02_07400 (holA)
Enzymes [BR:
bno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K8P02_07400 (holA)
DNA replication proteins [BR:
bno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K8P02_07400 (holA)
DNA repair and recombination proteins [BR:
bno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K8P02_07400 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
UAK44085
LinkDB
All DBs
Position
complement(1920294..1921313)
Genome browser
AA seq
339 aa
AA seq
DB search
MAKQELSCDDILKELRAKQYRPIYYLMGEESYYIDLIADYITDNVLSETEKEFNLTVVYG
ADVDIATVINAAKRYPMMSEYQVVIVKEAQAIRNMEELSFYLQKPLNSTILVICHKHGTL
DKRKKLVAEVEKVGILFESKKIKDSQLPVFINSYMKRKGIDMEPKASAMLADFVGTDLSR
LTGELEKLIITLPAGQKRVTPEQIEKNIGISKDYNNFELRSALVEKDILKANKIIKYFEE
NPKTNPIQMTLSLLFNFYSNLMLSYYSPEKTEQGIASWLGLKSPWAARDYLTAMRRYNGV
KTMQIIGEIRYADAKSKGINNASMSDGDILRELVFKILH
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaagaacttagttgcgatgacatcctcaaagaattgagggctaagcaatac
cgcccgatctattacttgatgggagaagaatcatattatatcgatctcatagccgattat
ataacagacaatgtattgagtgaaaccgagaaagaattcaatctgactgtagtatatggt
gctgatgtagacatagcaacggttattaatgctgctaaacgatatcctatgatgtccgaa
tatcaggtagtaattgtaaaggaagcacaagcaatacgtaatatggaagagctttctttt
tatcttcagaaaccattgaactctaccatccttgtaatatgccacaaacatggtacattg
gacaaacgaaagaaactggtggcagaagtagaaaaggtcggtattctatttgaatccaaa
aagatcaaagactctcaacttcctgtatttataaactcatacatgaaacgtaaaggcatc
gacatggagcctaaagcgtcggctatgcttgcagattttgtgggtacggatctaagccgc
cttacaggagaactggagaagttaatcattaccttacccgcaggccagaagagagtgaca
cctgaacaaatagagaagaatataggtatcagcaaagattataataactttgaactacgt
agtgcattagtagagaaggatattcttaaagcaaataaaataataaaatactttgaggaa
aatccgaaaactaatccgatacaaatgaccctttcattgctattcaatttttattcaaat
ctaatgttatcctactattctcccgaaaaaacagaacaggggattgcctcttggttaggt
ctgaaatcgccttgggccgcccgcgattatctaactgccatgcgtcgttacaacggtgta
aagaccatgcaaatcattggagaaatacgatatgcagatgcaaaatccaaaggaataaac
aatgcatctatgagcgatggcgatattcttcgtgaattggtgtttaaaattcttcattga
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