Bacteroides nordii: K8P02_13965
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Entry
K8P02_13965 CDS
T07941
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bno
Bacteroides nordii
Pathway
bno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K8P02_13965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bno03019
]
K8P02_13965
03400 DNA repair and recombination proteins [BR:
bno03400
]
K8P02_13965
Enzymes [BR:
bno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K8P02_13965
Messenger RNA biogenesis [BR:
bno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K8P02_13965
DNA repair and recombination proteins [BR:
bno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K8P02_13965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DnaD_N
HTH_IclR
HEM4
Peptidase_M41
Motif
Other DBs
NCBI-ProteinID:
UAK41312
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All DBs
Position
3553194..3555104
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AA seq
636 aa
AA seq
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MVFYRDILKQYWGYDSFRGVQEEIINSIGEGRDTLGLMPTGGGKSITFQVPALAKEGLCI
VITPLIALMKDQVQNLRQRGIKAVAIYSGMTRQEILIALENCIFGDYKFLYISPERLDTD
IFKQKLRAMKISMITVDESHCISQWGYDFRPAYLKIADIRELLPGVAVLALTATATPEVV
KDIQSRLKFKEENVFRMSFERKNLAYIVRKVDNKTAELLHILQRMQGSAIVYVRSRRRTK
EITELLINEGITADFYHAGLDNAVKDIRQKRWQSGECRVMVATNAFGMGIDKPDVRLVIH
LDLPDSPEAYFQEAGRAGRDGEKAYAVILHTSLDKTALHKRVPDTFPDKDYIIKVYEHLQ
YYYQMAMGDGLDCTKEFNLEEFCRKFKHFPVPADSALKILTQAGYIEYTDEQDNASRILF
TIRRDELYKLREMGKEAEALMQTVLRSYTGIFTDYAYISETALSLRTGLTRSQIYNLLMM
LSKRRIIDYIPRKKTPYIIYTRERVEPDRLHIPPSVYEERKKRYVARIEAMVEYVTSETA
CRSRMLLRYFGEKNEHNCGQCDVCLSGKASKDLSDNTFEEVKEKLLDLLKERPLTPAEVS
KRMEEDKNILAQVIQYLLEEEIIKTEDGMLSKVIGL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggtgttttaccgcgatatactcaaacaatactggggttatgactccttccgtggtgta
caggaggagattatcaatagtattggcgaagggcgtgatacactgggattaatgcctacc
ggtggtgggaaatccattacattccaggtcccggcactcgccaaagagggtttgtgcatc
gttatcactccactcatcgccctgatgaaggaccaggtgcagaatctccgtcaaaggggg
atcaaagctgtagccatctactcgggcatgacgcggcaggaaattcttattgcgctggaa
aactgtatcttcggcgattataaattcctctatatctcaccggaacgactggacacggac
atcttcaaacagaaactccgtgccatgaagatcagcatgattacggtagacgaaagccat
tgtatctcccaatggggatatgacttccggcctgcctatctgaagatagccgatatacgc
gaactattgcccggagtagccgtactggcactcactgccacagccacaccggaagtagta
aaagacatccaaagccggttgaagtttaaggaagaaaacgttttccggatgagcttcgag
cgaaagaatcttgcctatatcgtacgcaaggtagataacaaaacggccgaactactacat
attcttcaacggatgcagggaagcgctatcgtctacgttcgtagtcgtcgccgtaccaaa
gaaatcactgaattgcttatcaacgaaggtatcaccgccgacttctatcatgccggacta
gacaatgccgtcaaagatatccgccagaaacgctggcaaagcggcgaatgccgtgtgatg
gtagcaaccaatgctttcggaatgggcattgacaaacccgatgtacgtctggtaatccat
ctcgatctgcccgactctcccgaagcctattttcaagaagcaggacgtgccggacgcgac
ggagaaaaggcatacgccgttattctccacacctcattggacaaaacggccctccacaaa
cgggtcccggacaccttccctgataaggattatatcataaaggtatatgaacatctgcaa
tattattatcagatggcaatgggagacggactcgactgtacaaaggaattcaacctggag
gaattctgccgcaagttcaagcattttccggttccggcagacagtgctttgaaaatactg
acccaggcagggtacatagaatataccgatgaacaggacaacgcctcacgtatcctcttt
accatccgtcgcgatgaactgtataagcttcgcgaaatgggtaaagaggcagaagcactg
atgcaaaccgtccttcgttcgtataccgggatcttcacggattacgcttacatcagcgaa
acagcattgagcctgcgtaccgggttgacacgttcgcagatatacaatctgctaatgatg
ctgtccaaacgtcgcattattgactatattcctcgtaagaaaacaccttatataatatac
acgcgcgaacgggtagaacctgaccgcctgcatatcccgccatccgtatacgaagaacgt
aagaaacgatacgtagcccgtatcgaggcaatggtagaatacgtcacctccgaaactgcc
tgccgtagccgtatgcttctccgttacttcggtgagaaaaatgaacataactgtgggcag
tgtgacgtatgcctcagcgggaaagccagtaaagacttgtcagacaataccttcgaagaa
gtaaaggaaaaactgctggatttactgaaagagcgccctctgactcccgcagaagtcagc
aaacgaatggaagaagataaaaacatactggcacaagtcattcaatatttattggaagag
gaaataataaaaacagaggatggaatgttgagtaaggttatagggttataa
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