Bacteroides nordii: K8P02_16135
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Entry
K8P02_16135 CDS
T07941
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bno
Bacteroides nordii
Pathway
bno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K8P02_16135 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bno03400
]
K8P02_16135 (priA)
Enzymes [BR:
bno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K8P02_16135 (priA)
DNA repair and recombination proteins [BR:
bno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K8P02_16135 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
nSTAND3
Zn_ribbon_6
AAA_30
SLFN-g3_helicase
IBR_1
RecA_N
DUF1272
Motif
Other DBs
NCBI-ProteinID:
UAK41689
LinkDB
All DBs
Position
complement(4104874..4107330)
Genome browser
AA seq
818 aa
AA seq
DB search
MKKYVDVILPLPLPRSFTYSLPDEGAENIQPGCRVVVPFGRKKFYTAIVCNVHFYAPVEY
EVKEISAILDTDPVLLPVQFKFWEWLADYYLCTQGDVYKAALPSGLKLESETIVEYNPDF
EAEGRLSEKEQLILDLLSKEPEQCVTKLEKESGIKNILTVIKSLLDKEALFVKEELRRTY
KPKIEVRVRLAGVPDERRLHILFDILSRAPKQLALLMKYVELSGVLGNAPVREVSKKELL
ERSGVSPAVLNGLVEKKIFEVYPYEIGRLNVQVNDVVSLNPLNEHQQRAYDEITERFRDK
NVCLLHGVTSSGKTEVYIHLINEMIRQGKQVLYLLPEIALTTQITERLKRVFGARLGIYH
SKFPDAERVEIWQKQLGTEGYDIILGVRSSVFLPFRNLGLVIVDEEHENTYKQQDPAPRY
HARNTAIVLSSLYGAKVLLGTATPSVETWYNATTGKYGLVELKERYKEIRLPEIIPVDIK
ELHRKKRMVGQFSPLLLQYIREALEQKEQVILFQNRRGFAPMIECRTCGWVPKCKNCDVS
LTYHKGINQLTCHYCGYTYQLPRSCPACDGTELVNRGFGTEKIEDDIKIAFPQAAVARMD
LDTTRTRSAYEKIIADFEQGKTDILIGTQMVSKGLDFDHVSVVGILNADTMLNYPDFRSY
ERAFQLMAQVSGRAGRRNKQGRVVLQTKSIDHPIISQVMANDYEQMVDGQLAERQMFHYP
PYYRLVYVYLKNRNEAMLEQTADVMAGKLRSVFGARVLGPDKPPVGRIQTFFIKKIVVKI
EYNAPMSRARELLLQVQREMIEDERFKSLIVYYDVDPM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatgttgatgtcatattgccactgccgcttccccggagctttacgtattct
ctccccgatgagggtgcggaaaatattcagccggggtgtcgggttgtggttcctttcgga
cggaagaagttttatacagctattgtttgtaatgtacatttttatgcccctgttgagtat
gaagtaaaagaaatatctgctatacttgatactgatcctgttttactgccggtgcagttt
aaattctgggagtggttggcggattactatctctgtacgcagggagatgtttacaaagct
gctctgccctcagggcttaaactcgagagcgagacaattgtagagtataatccggatttt
gaggcggaaggacgtttgtctgagaaagagcaactcattcttgatttattgtctaaagaa
ccggagcaatgcgtcaccaagctggagaaggagagtggtattaaaaacattcttactgtt
attaaatctttgcttgataaagaggctctttttgtgaaggaggaacttcgacgaacttat
aaacccaaaatcgaggttcgtgttcgtctggcaggtgttcccgatgaaagacgtctgcat
attctgtttgacattctctcccgggcgcccaagcagttggccttgttgatgaaatatgta
gagctttcgggagtcttaggtaatgctcctgtgagagaggtgtctaagaaagaattgctg
gaacgttccggtgtttctcccgctgtgctgaatggattggtggagaagaagatctttgag
gtctacccttatgaaatcgggcgtttgaatgttcaggtcaacgatgtggtatctctcaat
ccgttgaatgaacaccaacagcgtgcatatgatgagataacagagcggtttcgggataag
aatgtctgtttgctgcatggtgttacttccagtggaaagacagaagtatatattcatttg
attaatgaaatgatccgacaggggaaacaggtactgtatctgttgccggaaatagcactt
actactcagattaccgaacgcttgaaacgggtatttggagctcgtttggggatttaccat
tcaaagtttccggatgcggaacgtgtggaaatctggcaaaagcaattgggtactgaagga
tatgatataatattgggagtacgttcttcggtttttcttccatttcgcaacctcgggttg
gtgatagtggatgaagaacatgagaatacctataaacagcaagaccctgcacctcgttac
catgcccgtaatacggcaattgtcttgtcctctttgtatggtgcgaaagttttattgggt
actgctactccttctgtggaaacctggtataatgctactactggcaaatacggtttggtt
gagttgaaagagcgatataaagaaatcaggttaccggagattattcccgttgatataaag
gaattgcatcgtaagaagcggatggtagggcaattctctccgttgcttcttcaatacata
cgtgaggcactggagcaaaaagagcaggttattctgtttcagaaccgtcgtgggtttgct
ccgatgattgaatgccgcacttgtggctgggtacctaagtgtaagaattgtgatgtcagt
ctgacttatcataaaggtatcaatcagctgacttgccattattgtgggtatacttatcag
ttgccccgttcctgtcctgcctgtgatggaacagagctggtcaatagaggatttggtacg
gagaagatagaagatgatataaaaatagcttttccccaggcagctgtggcgcgtatggat
ttggataccactcgtacccgttctgcttatgaaaagattattgccgactttgaacaggga
aaaacggatattcttatcggtacacagatggtgtctaagggattggattttgatcatgtc
agtgtggtgggaattctgaatgccgatactatgttgaattatccggattttcgttcctat
gaacgggcttttcagttgatggcgcaagtgtccggacgtgccggaagaagaaataagcaa
ggccgtgttgtattgcagaccaaaagtatagatcatcctattatctcacaggtgatggca
aatgattatgaacaaatggtagacgggcagcttgccgaaagacagatgttccattatcct
ccttattaccggttggtctatgtatacctgaaaaaccggaatgaagcaatgctggaacaa
actgctgatgtaatggcagggaaattacgttcggtattcggggcacgggtgttaggcccg
gataaacctccggtggggcgtattcagactttttttataaagaagatcgttgtgaagata
gagtataatgctcctatgagccgtgcgcgggagttactcctgcaagtacagcgggaaatg
attgaagatgagcgtttcaaatcactaatcgtgtactacgatgtcgatcctatgtag
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