Bacteroides nordii: K8P02_16600
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Entry
K8P02_16600 CDS
T07941
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bno
Bacteroides nordii
Pathway
bno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K8P02_16600 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bno03019
]
K8P02_16600 (pnp)
03016 Transfer RNA biogenesis [BR:
bno03016
]
K8P02_16600 (pnp)
Enzymes [BR:
bno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K8P02_16600 (pnp)
Messenger RNA biogenesis [BR:
bno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K8P02_16600 (pnp)
Transfer RNA biogenesis [BR:
bno03016
]
Prokaryotic type
tRNA degradation factors
K8P02_16600 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
RNase_II_C_S1
BAF1_ABF1
Motif
Other DBs
NCBI-ProteinID:
UAK41771
LinkDB
All DBs
Position
4211567..4213693
Genome browser
AA seq
708 aa
AA seq
DB search
MINPIVKTIELGDGRTITLETGKLAKQADGSVMLRMGNTMLLATVCAAKDAVPGTDFMPL
QVEYKEKFAAFGRFPGGFTKREGRASDYEILTCRLVDRALRPLFPDNYHAEVYVNIILFS
ADGVDMPDALAGLAASAALAVSDIPFNGPISEVRVARIDGKFVINPTFDQLEQADMDLMV
AATYENIMMVEGEMHEVSEAELLEAMKVAHEAIKIHCKAQMELTQEVGKTVKREYSHEEN
DEELRKAVREACYDKSYAIAASGNRNKHERQEAFDAIRDEFKAQFTEEELAEKSALIDRY
YHDVEKEAMRRCILDEGKRLDGRKTNEIRPIWSEVNPLPGPHGSAIFTRGETQSLTSVTL
GTKLDEKTIDDVLVHGKERFLLHYNFPPFSTGEAKAQRGVGRREIGHGHLAWRALKGMIP
TDYPYVVRVVSDILESNGSSSMATVCAGTLALMDAGVKIKKPVSGIAMGLIKNAGEDKYA
VLSDILGDEDHLGDMDFKVTGTENGITATQMDIKVDGLSFDILERALNQAKEGRMHILGK
MLETIDEPRTELKDHAPRIETMTIPKEFIGAIIGPGGKIIQGMQEDTGATITIEETDGVG
RIEIAGTNKKSIDDAMRIIKGIVAVPEVGEIYKGKVRSIMPYGAFVEFLPGKDGLLHISE
IDWKRLETVEEAGIKEGDEIEVKLMDVDPKTGKFKLSRKVLLPKPEKK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacccaattgttaagacgatcgagttaggagatggcagaaccatcacgctcgaa
acgggaaagttggcaaaacaggcagacggttctgtaatgcttcgcatgggtaacaccatg
ttacttgctactgtttgtgccgctaaagatgcagttcccggaacagatttcatgccgctt
caggtagagtacaaagaaaaatttgcagcatttggccgctttcctggtggttttacaaaa
agagaaggaagagcttctgattatgagattcttacttgccgtttagtagaccgtgctctc
cgccccctattccccgataattatcacgcagaagtttatgtaaatattatcctgttctca
gcagatggtgttgacatgcccgatgcattggcaggacttgccgcttcagcagcacttgct
gtatcagatattccattcaacggaccgatttcagaagtacgtgtagcacgtattgatggt
aagttcgttatcaatcctactttcgaccagcttgaacaagcagatatggacctcatggtt
gccgctacttatgaaaatatcatgatggtagaaggcgaaatgcacgaagtatcagaagca
gaactgctggaagcaatgaaagtagctcacgaagctattaagattcattgtaaagcacag
atggaactaactcaggaagttggtaaaactgtaaaacgtgaatactcacacgaagaaaac
gatgaagaacttcggaaggctgttcgcgaagcttgctatgacaaatcatatgcaattgca
gcttccggcaacagaaacaagcacgaacgtcaggaagctttcgatgctatccgcgacgaa
ttcaaagctcagtttactgaagaagaactggctgagaaaagcgcattgattgaccgttac
tatcatgatgtagaaaaagaggctatgcgccgttgtattctggacgaaggtaaacgtctg
gacggacgtaaaacaaacgagattcgtcctatctggagcgaagttaatccattgccggga
cctcacggatcagctatcttcactcgtggagaaactcagtcactgacatctgttacactt
ggaaccaagctcgatgaaaagactatagacgatgtactggttcacggaaaagagcgtttc
ttattgcattataatttccctcctttctctacaggagaagcaaaagcacagcgtggtgta
ggacgtcgtgaaattggtcacggacacttggcatggcgtgcattaaaaggtatgatcccg
acagattatccttacgtagttcgtgtcgtttctgatatcctcgaatccaacggttcttct
tccatggctactgtttgtgccggaacattggcactgatggacgctggtgtaaagatcaaa
aaaccggtatctggtatcgctatgggattaatcaagaatgcaggtgaagacaaatatgca
gtactttcggatatccttggtgatgaagaccacttgggagatatggacttcaaagtaacc
ggaactgaaaacggtatcactgctacacagatggatattaaggtagacggcttgtcattt
gatatccttgaacgtgcattgaatcaggcaaaagaaggacgtatgcatatcctcggtaag
atgctcgaaacaattgacgaacctcgtactgaactgaaagaccatgctccacgtattgaa
acaatgactattccgaaagaattcatcggagctatcattggcccgggcggaaagatcatt
cagggcatgcaggaagatacaggtgctactatcaccatcgaagaaacagacggagtaggt
cgtatcgaaatagccggaaccaacaaaaaaagcattgacgacgctatgcgtatcatcaaa
ggcatcgttgctgtacccgaagttggtgaaatatacaaaggtaaagttcgttctattatg
ccttatggtgcattcgttgaattcctgccaggcaaagacggattgctccacatctctgaa
atcgactggaaacgtctggaaacagtagaagaagccggaatcaaagaaggtgacgagatt
gaagtgaaactaatggatgttgatcctaaaactggaaaatttaagctgtccagaaaagta
ttacttccaaaaccggaaaagaaataa
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