Bacteroides nordii: K8P02_16785
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Entry
K8P02_16785 CDS
T07941
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bno
Bacteroides nordii
Pathway
bno02020
Two-component system
bno02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bno00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K8P02_16785 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K8P02_16785 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bno03021
]
K8P02_16785 (rpoN)
Transcription machinery [BR:
bno03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K8P02_16785 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
HTH_12
SF3b1
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UAK41806
LinkDB
All DBs
Position
4261022..4262503
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AA seq
493 aa
AA seq
DB search
MAQGSRQIQSQAQQQIQTLSPQQILVVKLLELPAVELEDRVHAELLENPALEEGREEAAA
DDPDESNSNDLEAESDANEYDSLGDYLNEDDIPDYKLQENNRSKGEQAEEIPFSDATSFY
EILREQLSERNLTEHQRELAEYLIGSLDDDGLLRKSLESISDELAIYAGINATEEELEEA
LCIIQDFDPAGLGARNLQECLLIQLQRKLEKGKPDKALMLEQRIINECYEEFTRKHWDKI
IKKLGCEEELFNTAISEITKLNPRPGASLGEAIGRNMQQIVPDFIVDTYDDGSISVNLNN
RNIPELRMSRDFTEMVEEHTKNRANQSKESKEAMMFLKQKMDAAQGFIDAVKQRQNTLMT
TMQAIIDLQRPFFLEGDESLLRPMILKDVAERTGLDISTISRVSNSKYVQTNFGIYPLKF
FFSDGYTTEDGEEMSVREIRKILKECIDNEDKKKPLTDDELAEILKEKGYPIARRTVAKY
RQQLNIPVARLRK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaggttcccgtcaaatacaatcccaggcgcagcagcagatacaaacgctctct
ccgcagcagattctggtagtaaagctattggagcttcccgccgtagaactggaagaccgt
gtacacgccgaattattggaaaatccagctcttgaagaaggtagagaagaagcggctgcc
gatgatccggatgaaagcaacagtaacgatctggaagcagaaagtgatgccaatgaatat
gattccctgggcgactatctaaacgaagacgacattcctgattataaattacaagaaaac
aaccgttccaaaggtgagcaggcagaggaaattcctttttctgacgctacttctttttat
gaaatattgagagaacaattgagtgaacgtaacctcacagaacatcagcgtgaactggca
gaataccttatcggctcactggacgatgacggcctgctccgcaaatcacttgaaagtatc
agcgatgagctggctatctatgcaggtatcaacgctaccgaagaggaactggaagaggct
ttatgtattatacaagacttcgacccggccggacttggtgcacgtaacctccaggaatgc
ttacttatacaactccaacgaaagctggaaaaaggtaagccggataaggcacttatgctg
gaacagagaattatcaatgaatgttacgaagagttcacacgtaaacactgggataagata
ataaagaaactgggatgcgaagaagagcttttcaacactgccatctctgaaatcacaaag
ttaaaccctcggccgggtgcttcattgggtgaagccatcggtcgtaacatgcagcaaatc
gttcccgactttattgtagatacctatgatgacggctctatcagcgtcaatctcaataac
cggaatataccggaacttcgtatgagccgtgacttcaccgaaatggtagaggagcatacg
aaaaacagagccaatcaatctaaagaatccaaagaagcaatgatgtttctgaaacagaaa
atggatgctgcccagggatttatcgatgcagtaaagcaacgtcagaatacattaatgact
accatgcaggctattatcgacctgcaacgccctttctttcttgaaggggacgaatcattg
cttcgccctatgatcctgaaagacgtggccgaacgtacgggactggatatctcaaccata
tcacgtgttagcaacagcaagtatgtgcaaacaaattttggaatctatccgctgaaattt
ttcttcagtgatggatatactaccgaagacggcgaggaaatgtcagtacgtgaaatacgt
aaaatactaaaagagtgtattgacaacgaagataaaaagaaaccactgactgacgatgaa
ctggccgagatcttaaaagaaaaaggatatcctattgcacggcgtaccgtagctaaatat
cgtcagcaactgaatataccagtggccagactaagaaagtaa
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