Bacteroides nordii: K8P02_17265
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Entry
K8P02_17265 CDS
T07941
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bno
Bacteroides nordii
Pathway
bno02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bno00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K8P02_17265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bno03021
]
K8P02_17265
Transcription machinery [BR:
bno03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K8P02_17265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_24
Sigma70_ECF
GerE
HTH_20
HTH_30
HTH_10
HTH_38
HTH_5
HTH_11
wHTH_Par
HTH_23
NUMOD1
HTH_40
UPF0122
HTH_28
HTH_AsnC-type
TnsD
DUF2774
TRL
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
UAK44958
LinkDB
All DBs
Position
4408873..4409460
Genome browser
AA seq
195 aa
AA seq
DB search
MHDAQLINGIRKGDHDTFRFIFDHYYALMCSIAYEYVEDYHLSQNIAEDVMLSIWEKREL
LNISTSVKSYLLTSVHNKSIDYLRSYSREAEVVSFESEIGSSSCYIPDQEMFEQIILSEL
EDKIEDIIREMPEECRKVFLLSRYGDKSYAEIADELNISVNTVKYHIKKALSLLREELKD
YILAITALYFYLFNQ
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatgcacagctcattaatggaataagaaaaggggaccatgatacattcagattc
atctttgaccattactatgccttgatgtgctccattgcatatgaatatgtagaagattat
caccttagccaaaatatagcggaagatgtcatgctctccatttgggagaaaagagaacta
ctgaatatttcaacatccgtaaagtcgtatctgctaacttctgtacacaataaaagtatt
gactatctacgcagttattcccgggaagcagaagtagtcagctttgaaagcgaaattggc
tcatcgagttgctatattccggaccaagagatgtttgaacaaattattttgtcggagctg
gaagataaaatagaagacatcatccgggaaatgccggaagaatgtagaaaagtgttttta
ctcagccggtacggtgacaaaagttatgctgagattgccgacgaactaaatatttctgtc
aataccgtaaaataccacataaaaaaagcactcagcttgcttagagaagagttgaaagat
tacattcttgctattacagccctatatttctatctctttaatcaataa
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