Bacteroides nordii: K8P02_18285
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Entry
K8P02_18285 CDS
T07941
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bno
Bacteroides nordii
Pathway
bno02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bno00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K8P02_18285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bno03021
]
K8P02_18285
Transcription machinery [BR:
bno03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K8P02_18285
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
GerE
Sigma70_ECF
HTH_24
HTH_23
HTH_11
NleF_casp_inhib
DUF3489
UPF0122
RPA_C
PF0610-like_N
Flg_hook
HTH_10
HTH_29
PhyR_sigma2
HTH_3
HTH_28
HTH_40
IbrB_C
Motif
Other DBs
NCBI-ProteinID:
UAK42085
LinkDB
All DBs
Position
complement(4729734..4730306)
Genome browser
AA seq
190 aa
AA seq
DB search
MDKKYIIGLQKGSYSDFNKLYDLYADRLYGFAYNLTHSSEMAEEIVQEVFLKIWQMREHL
SPEYSFRSFLFTIAKNKFLNDLRNRLTLLSYDEYIAQLDITEGGENSTENEFNFNELNEQ
VLQSKDKLSKRQKMIFEMSKEEGLSNQEIALKLGISEQSVRNQLSSALKVLREELTKIGF
SFALFFMSQW
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaatacattataggcttacagaagggctcatattctgatttcaataaatta
tatgacctttatgcagatagattgtatggctttgcttacaacctgacacattcgtcggag
atggcagaggaaattgtgcaggaagtctttttaaaaatctggcagatgcgggagcactta
tctcccgaatattcttttcgttcttttctcttcacgattgccaaaaataaattcttgaat
gatctcagaaaccggctcaccttgctttcttatgacgaatacatagctcaactggatata
acggaaggaggagaaaactccacagaaaatgagtttaacttcaatgagttgaatgaacag
gtcctccaatccaaagacaaactgagtaaacggcaaaagatgatatttgaaatgagtaaa
gaagaaggattgtcaaatcaggaaattgctttaaagcttggcatctccgaacaatctgtc
agaaatcaattaagtagtgcactcaaagttctcagagaagagctcactaaaatcggcttt
tctttcgctctcttttttatgagtcagtggtaa
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