Bacteroides nordii: K8P02_18940
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Entry
K8P02_18940 CDS
T07941
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bno
Bacteroides nordii
Pathway
bno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K8P02_18940 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bno03400
]
K8P02_18940 (ruvB)
Enzymes [BR:
bno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K8P02_18940 (ruvB)
DNA repair and recombination proteins [BR:
bno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K8P02_18940 (ruvB)
RecFOR pathway proteins
K8P02_18940 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_22
AAA_16
Mg_chelatase
TIP49
nSTAND3
TsaE
AAA_14
AAA_18
NB-ARC
Rad17
AAA_PrkA
NTPase_1
RNA_helicase
NPHP3_N
AAA_28
AAA_33
ABC_tran
AAA_17
DUF815
bpMoxR
AAA_24
Sigma54_activ_2
NACHT
Motif
Other DBs
NCBI-ProteinID:
UAK42208
LinkDB
All DBs
Position
4898428..4899450
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AA seq
340 aa
AA seq
DB search
MEEDFNIRDHQLTSRERDFENALRPLSFEDFSGQDKVVENLRIFVKAARLRGEALDHVLL
HGPPGLGKTTLSNIIANELGVGFKVTSGPVLDKPGDLAGVLTSLEPNDVLFIDEIHRLSP
VVEEYLYSAMEDYRIDIMIDKGPSARSIQIDLNPFTLVGATTRSGLLTAPLRARFGINLH
LEYYDDDVLSNIIRRSAAILDVPCSIPAAGEIASRSRGTPRIANALLRRVRDFAQVKGSG
SIDTEIATFSLEALNIDKYGLDEVDNKILCTIIDKFKGGPVGLTTIATALGEDAGTIEEV
YEPFLIKEGFLKRTPRGREVTELAYKHLGRSLYSSQQTLF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatttcaatatacgcgatcatcagttgacaagccgggaacgggattttgag
aatgcgctccgtccccttagcttcgaggatttcagcgggcaggataaggtggtggagaat
ctccgcatttttgtcaaagccgcccgtcttcgtggtgaagcattagaccatgtattgctg
catggccctcccggattgggaaaaacaactctctcaaacattatagccaatgaacttgga
gtaggctttaaagtcacttcaggcccggtgctcgataaacccggtgatctggcgggtgta
cttaccagtcttgaaccgaacgatgtcctgtttattgacgagatccaccgtctgtcacct
gtggtagaggagtacctgtactctgctatggaagactaccggattgatattatgatagat
aaaggaccctctgcacgcagtattcagatagatctgaatccttttacgctggtgggagct
actacccgtagtgggctgttgacagctccgttgcgtgcgcgttttggcattaacctgcat
cttgaatattatgatgacgatgtgctgagtaatattatccgtcgttcggctgctatcctt
gatgtaccttgttcgatacccgctgcgggagagattgcttcgcgtagccggggtacccct
cgtattgccaatgcactgcttcgtcgtgtgcgcgactttgctcaggtgaagggttccggt
tctattgatacggagattgctactttttcacttgaagcactgaatatcgacaaatacgga
ttggatgaagtggacaacaagatcctctgtaccattatcgataagttcaagggtggtccg
gtaggacttactaccattgccaccgctttgggtgaagatgccggaacaatcgaagaggta
tacgaaccgttcctgattaaagaaggtttcctgaaacgtacccctcgtgggcgtgaagtg
acggaactggcttacaaacatttggggaggagtctttatagtagtcaacaaacactgttt
tag
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