Bacillus nitratireducens: GSN03_00190
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Entry
GSN03_00190 CDS
T07605
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bnt
Bacillus nitratireducens
Pathway
bnt03030
DNA replication
bnt03430
Mismatch repair
bnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSN03_00190 (holB)
03430 Mismatch repair
GSN03_00190 (holB)
03440 Homologous recombination
GSN03_00190 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bnt03032
]
GSN03_00190 (holB)
03400 DNA repair and recombination proteins [BR:
bnt03400
]
GSN03_00190 (holB)
Enzymes [BR:
bnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GSN03_00190 (holB)
DNA replication proteins [BR:
bnt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GSN03_00190 (holB)
DNA repair and recombination proteins [BR:
bnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GSN03_00190 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_22
TIP49
Motif
Other DBs
NCBI-ProteinID:
QUG82002
LinkDB
All DBs
Position
36226..37209
Genome browser
AA seq
327 aa
AA seq
DB search
MIKTWEQLSALQPIGVKMLMNSIAKERISHAYLLEGGKGTGKFATAIQMAKSFLCLQRNG
VEPCHVCTNCRRIDSGNHPNLHIVKPDGLSIKKQQIQDLQEEFSKTGLEANKKVYIIEHA
DRMTANAANTLLKFLEEPSSDTTAILLTEQSHQILNTILSRCQVVTFRPLPTESLIKRLE
EEGITVSLSTLAAQLTNSFEEALLICNDEWFAQARALVIKLCEALEKDKASIFFVQEKWG
KHFGEKEQLQQGLDMLLLIYKDLLYVQLGEEDRLVFHEQKEMFESFSYAQKRIVSALFHI
LEAKNRINANVNAQLVFEQLVLRLQEG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgataaagacgtgggagcagctttctgctttacagcccatcggtgtcaaaatgttgatg
aatagcattgcaaaagagcgtatatcccacgcttacttgttagagggggggaaagggact
gggaagttcgcaacagcaattcaaatggcaaaaagttttctctgcttacaaagaaatggt
gtagagccttgtcatgtatgtacgaattgtcgccgaattgattcaggtaaccacccaaac
ttacatattgtaaaacccgatggattatctattaaaaaacagcaaatccaagatttacaa
gaagagttttcaaaaacaggattagaagcaaataaaaaagtatatattattgagcatgca
gatcgtatgacagcaaatgcagcgaatacactcttaaagtttttagaggaaccaagtagt
gatacaacagccattttacttactgaacaaagtcatcagattttaaatacaatcttatct
cgttgtcaagttgttacatttaggccgttacctacagaatccttaattaagagattagag
gaagaaggtattacagtttctttatctacactggctgcacagcttacaaatagttttgaa
gaagctttattaatctgtaatgatgaatggtttgcacaagcgagagctttagtgataaaa
ttatgtgaagcgctcgaaaaagataaggcctctattttttttgtacaagaaaaatggggg
aagcactttggagagaaagaacaattacagcaaggcttagatatgttactccttatttat
aaggatttattatatgttcaacttggagaagaagatcgtcttgtttttcatgagcagaaa
gagatgtttgaatccttttcttatgctcagaagcgcattgtatcagctctctttcatata
ttagaggcaaaaaatagaatcaacgctaatgtaaatgcgcagcttgtgttcgaacagtta
gtgttgcggttgcaggagggatga
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