Bacillus nitratireducens: GSN03_01255
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Entry
GSN03_01255 CDS
T07605
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bnt
Bacillus nitratireducens
Pathway
bnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSN03_01255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnt03019
]
GSN03_01255
03009 Ribosome biogenesis [BR:
bnt03009
]
GSN03_01255
Enzymes [BR:
bnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSN03_01255
Messenger RNA biogenesis [BR:
bnt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GSN03_01255
Ribosome biogenesis [BR:
bnt03009
]
Prokaryotic type
rRNA helicases
GSN03_01255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QUG82194
LinkDB
All DBs
Position
229907..231511
Genome browser
AA seq
534 aa
AA seq
DB search
MTTFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL
LDKVDTRKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH
PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL
FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSP
ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGAIEVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTK
RKVDRMEAPTLDEALEGQQRLIAEKLQSTIENDNLSYYKRIAEEMLEENDSVTVVAAALK
MMTKEPDTTPIALTSEPPVVSRGGGSKKRGGNGGGYRDGNRNRSRDGRSGDGRNRDRDRD
RNRDGRSGDGRNRDRNRDGGSRDGNRGRRGEGQGRPGSSSNGRGERKHHSRPQA
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcgagaattaggattaagtgaatctttattgcaatctgttgaaagtatg
ggctttgaagaggctacgccgattcaagctgaaacaatcccacatgcattgcaaggtaaa
gatattattgggcaagcgcaaacaggtacagggaaaacagcagcatttggattaccgcta
ttagataaagtagatactcgtaaagaagcagttcaaggtattgttatcgcgccaacgcgt
gaattagcaatccaagttggagaagagctatacaaaattggtaaacataaacgtgttcgt
attttaccaatttacggtggtcaagatattaaccgccaaattcgtgctctaaaaaaacac
ccacacattattgttggtacgccgggtcgtattttagatcatattaaccgtaaaacactt
cgtttacaaaacgttgagactgttgttcttgatgaagcggatgaaatgttaaacatgggc
ttcattgaagatattgaagcgattttaacagatgtgccagaaacacatcaaacattatta
ttctcagcgacaatgccagatccaatccgtcgtattgctgagcgcttcatgactgagcct
caacacattaaagtaaaagcaaaagaagtaacaatgccaaacattcagcagttctattta
gaagtgcaagaaaagaaaaagtttgacgtgttaacacgcttactagatattcaatctcca
gagcttgcaatcgtattcggtcgtacaaagcgtcgtgttgatgaattatcagaagcatta
aacttacgtggttatgcagcagaaggtattcatggtgatttaacacaagcgaaacgtatg
tctgtattacgtaaatttaaagaaggtgctattgaagttcttgttgcaacggacgttgct
gcgcgtggtcttgatatttcaggcgtaacacacgtatacaacttcgatatcccacaagat
ccagaatcatacgttcaccgtatcggtcgtactggccgtgcaggtaaaaaaggtattgca
atgttatttgtaacaccacgtgaatcaggacaattaaaaaatatcgagcgtacaacaaaa
cgtaaggttgaccgtatggaagcaccgacacttgacgaggcactagaaggtcaacaacgt
ttaatcgctgaaaaacttcaaagcacaattgaaaatgataacttatcatactacaagcgt
attgcagaagaaatgttagaagagaatgactctgtaacagtagtagctgctgctttaaaa
atgatgacaaaagagccagatacaacaccaatcgctttaacatcagaaccaccagttgtt
tcaagaggtggcggttctaaaaaacgcggtggtaacggaggcggataccgtgatggtaac
cgtaatcgtagtcgtgatggacgtagtggcgatggtcgtaaccgtgaccgtgaccgtgac
cgtaaccgtgatggacgcagtggcgatggtcgtaaccgtgatcgcaatcgtgatggtggt
agccgtgatggtaaccgtggtcgtagaggtgaaggtcaaggtcgccctggatcttcttca
aatggacgcggcgaaagaaaacatcatagccgtccacaagcttaa
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