Bacillus nitratireducens: GSN03_05380
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Entry
GSN03_05380 CDS
T07605
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bnt
Bacillus nitratireducens
Brite
KEGG Orthology (KO) [BR:
bnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnt03019
]
GSN03_05380 (yhaM)
Messenger RNA biogenesis [BR:
bnt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GSN03_05380 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QUG82907
LinkDB
All DBs
Position
1070563..1071507
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AA seq
314 aa
AA seq
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MKKKIAEYEVGEQVDVFLLIKTATKGLASNGKPFLTVILQDPSGDIEAKLWDVSPEVEKQ
YVAETIVKVAGDILNYKGRIQLRVKQIRVANENEVTDISDFVEKAPVKKEDMVEKITQYI
FEMRNPNIQRLTRHLLNKHQNEFLEYPAATKNHHEFVSGLAYHVVSMLDLAKAISALYPS
LDKDLLYAGVILHDLGKVIELSGPISTTYTLEGNLLGHISIMVNEIGKAADELNIDAEEV
LILQHIVLSHHGKAEWGSPKPPLVKEAEILHYIDNLDAKMNMMDRALGRTKPGEYTERVF
ALDNRSFYKPTFHN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaaattgcagaatatgaagttggtgaacaagtcgatgttttcttgttaatt
aaaacagcgacaaaaggtctagcaagcaatgggaaaccatttttaacagtaatcttacaa
gatccaagtggagatattgaagcgaagctatgggacgtatcgccagaagttgagaaacaa
tatgtagcagaaacaatcgttaaagtagctggtgatattctaaactacaaagggcgtatt
caattacgtgtgaaacaaatccgagttgcgaatgaaaatgaagtaacagatatctcggat
ttcgtagaaaaagcaccagtgaaaaaagaagatatggttgaaaaaattacgcaatacata
tttgaaatgagaaacccgaacattcagcgtctaacaagacatttgttaaataagcaccaa
aacgaatttttagaatatccagcagcgacgaaaaatcatcacgagttcgtatctggacta
gcttaccatgtcgtatcgatgttagatttagcgaaagctatttcggctctatacccatcg
ttagataaagacttactatatgcgggcgttattttacacgaccttggtaaagtaattgag
ctatctggcccgatttctacaacttatacgttagaggggaatttacttggccacatttca
attatggtgaacgaaattggtaaagcagcagacgagctgaacatcgatgcagaagaagta
ttaatccttcagcacatcgtcctttcccatcacggaaaagcagaatggggtagcccaaaa
ccaccattagtaaaagaagcagaaattctgcactacatcgataacttagatgcaaaaatg
aacatgatggaccgtgcattaggacgcacaaaaccaggcgaatacacagaacgtgtcttt
gcgcttgataatcgttcgttctataagccaactttccataattaa
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