Bacillus nitratireducens: GSN03_05850
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Entry
GSN03_05850 CDS
T07605
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bnt
Bacillus nitratireducens
Brite
KEGG Orthology (KO) [BR:
bnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bnt03400
]
GSN03_05850 (addB)
Enzymes [BR:
bnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSN03_05850 (addB)
DNA repair and recombination proteins [BR:
bnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GSN03_05850 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_16
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QUG82995
LinkDB
All DBs
Position
1165459..1168974
Genome browser
AA seq
1171 aa
AA seq
DB search
MSLRFVIGRAGSGKSTLCLHEVQEELKQRPRGKTILYLVPEQMTFQTQQALIGSEEVRGS
IRAQVFSFSRLAWKVLQEVGGASRLHIDEAGVHMLLRKIVESRKDGLSVFQKAAEQNGFF
EHLGSMIAEFKRYNVTPSNVYEMWQQLDAHSSSAEQKLLANKVYDLQLLYDDFERALIGK
YLDSEDYLQLLIEKLSDSEYVKGAEIYIDGFHSFSPQELEIVRGLMKLGTRVTITLTIDE
KTLAQPVNELDLFYETTLTYERIKQVAREEKIEIEKTIPLMEQPRFHSQALAHLETHYEA
RPNEKFHGEASVTISTAANLRAEVEGVAREIRRLVADEDYRYRDVAVLLRNGESYYDVMR
TLFTDYNIPHFIDEKRPMSHHPLVECIRSALEIISGNWRYDAVFRCVKTELLYPLDVRKE
AMREEMDEFENYCLAYGVQGKRWTSEDPWMYRRYRSLDDASEMITDSEREMEEKINRLRD
VVRTPVIRMQKRLKRAGTVMQMCEAVYLFLEELDVPKKLEELRVRAEENGDFLFATDHEQ
VWEEVMNLLDTFVEMLGEEKMSLSMFTEVMSVGLEALQFANIPLSLDQVLVANIDHSRLS
DIKATFIIGVNEGVIPAAPMDEGMLSDEERNVLTAAGIELAPTTRQTLLEEQFVMYQMVT
RASEKLYISCPLADEEGKTLLASSFIKKIKRMFPDVKESFITNDVNDLSRSEQISYVATP
EVTLSYVMQQLQTWKRYGFEGNLDFWWDVYNFYVTSDEWKQKSSRVLSSLFYRNRAQKLS
TAVSRDLYGDTIKGSVSRMELFNRCAYAHFAQHGLSLRERDIFKLDAPDIGELFHAALKR
IADRLLRENRTWADLSIKECEHLSTLVIEEIAPLLQRQILLSSNRHFYLKQKLQQIIFRT
SLILREHAKSSGFVPVDLEVPFGMGGTGSLPPMEFALPNGVKMEVVGRIDRVDKAEDESG
TFLRIIDYKSSSKALDLTEVYYGLALQMLTYLDVVTSNAHTWMKKGGTASPAGVLYFHIH
NPIVEMKGDASEEEIEKEILKKFKMKGLVLGDADVVRLMDNKLSTGSSDIISAGLKKDGS
FSARSSIASEQEFNVLQKYVHHSFENIGKDITEGVIDIAPYKKGNKAACTFCNFKSVCQF
DESLEDNQFRTLKDMKDSEAMEKIREEVGGE
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttcgatttgtgattggtagagctggaagtggaaaaagtacactttgtttacac
gaagtgcaagaagagttaaagcagcgtccaagagggaaaacaatattatatcttgtgcca
gaacagatgacattccaaacgcagcaggcgttaattgggagtgaagaggtaagaggttct
attcgggcacaagtttttagtttttcgcgattagcgtggaaggtgctgcaagaagttggc
ggagcgagtcgtcttcatattgatgaagccggtgtacatatgttacttcgtaaaattgta
gaatctcgtaaagatggattatcggtgtttcaaaaagcagcggagcaaaacggtttcttt
gaacatcttggtagtatgattgcggagtttaaacgttataatgtgacgccatctaacgta
tatgaaatgtggcaacaattagatgcgcatagtagtagtgcagagcaaaagctgctagcg
aataaagtgtatgatttacagttattatatgatgatttcgaacgtgctttaatcggaaaa
tatttagattcagaagactacttacaattattaattgagaagctttcagactctgagtat
gtaaaaggcgcggaaatttatatagatggattccattcattttcccctcaagagctagaa
attgttagagggttaatgaaattaggaactagagtaacaataacattaacgatagatgaa
aaaacgttagcgcagccagtgaatgaactagatttattttatgaaacgacgttaacgtat
gaacgaataaaacaagtagcgcgtgaagagaaaatagaaattgaaaaaacaattccgctg
atggaacagccgcgttttcattcgcaagcattagcgcatttagaaacgcactacgaagca
cgtccaaatgaaaaatttcatggtgaagcgagtgtgacaatcagtacagcagctaattta
cgagctgaagtagaaggtgtagctcgtgaaattagaagacttgtggcggatgaagactat
cgttaccgagatgtcgcagtccttcttcgtaacggagaaagttattacgacgtaatgcga
acgttatttacggattataatatcccgcatttcatcgatgaaaaacgcccaatgtcacat
catccgctagtagaatgtattcgttctgctttagagattattagtgggaattggcgttat
gatgcagtattccgctgcgtgaaaacagagcttttatatccattagatgtaagaaaagaa
gcgatgcgcgaagagatggatgagttcgaaaactactgtttagcgtacggtgtacaaggg
aagagatggacttctgaagatccgtggatgtatcgtcgttatcgttctcttgatgatgcg
agcgaaatgataacagacagtgagcgtgaaatggaagagaaaataaatcgacttcgcgac
gttgtaagaacgccagttattcgtatgcaaaaaagactgaagcgtgctggaacagttatg
caaatgtgcgaagcggtatatttatttttagaggagcttgacgttccgaaaaaactagaa
gaattacgtgttcgtgcagaagaaaatggagatttcttatttgcgacagaccatgagcaa
gtatgggaagaagtgatgaatcttcttgatacgttcgttgagatgcttggtgaggagaaa
atgtcactatctatgttcacggaggttatgtcggtaggtcttgaggcacttcaatttgcg
aacattccgctgtcactagatcaagtgttagttgctaatattgatcattctagattatca
gatattaaagcgacgttcattattggagtaaacgaaggtgtgattccagcagcgcctatg
gatgaaggtatgctttctgatgaggaaagaaatgttctcaccgctgcaggtatcgaatta
gcaccaacgacgagacaaactttactagaagaacagttcgttatgtatcaaatggtgacg
agagcatctgagaagttatacatttcttgtccgcttgcagatgaggaagggaagacgtta
cttgcgtctagctttattaagaaaataaaaagaatgttccctgatgtgaaagaatcattt
attacaaatgacgtaaatgacttatcacgttcggaacaaatttcatacgtagcaacgcca
gaagtgacattgtcttatgtcatgcagcagctgcaaacatggaagcgatacggatttgaa
ggtaatttagacttttggtgggatgtatataacttctacgttacttccgatgaatggaag
caaaaaagtagccgtgtgttatcaagtttattctaccgaaatcgtgcacagaaattaagt
acagctgtaagtagggatttatatggagatacaattaagggaagcgtttctcgtatggaa
ttatttaaccgttgtgcgtacgctcatttcgcgcagcacggtttatcgctaagagagcgt
gatattttcaaacttgatgcgccagatatcggtgaactattccatgcagcgctgaagaga
attgcagacaggctattacgtgaaaaccgtacttgggcagatttatcaataaaagagtgt
gagcatctttctactttagtaatagaagaaattgcaccattattacaaagacaaatttta
ttaagttcaaaccgtcatttctatttaaaacaaaaactacaacaaatcattttccggaca
tcacttattcttcgtgaacatgcgaagtctagcggttttgtaccagttgatttagaagta
ccgttcggtatgggcgggactggatcgcttccgccaatggaatttgcgttgccaaatggt
gtgaagatggaagtagttggccgtattgaccgtgttgacaaggcggaagatgagagtggt
acgttccttcgtattattgactataaatcaagttcgaaagcgttagatttaacagaagtg
tattacggactcgcacttcaaatgttaacgtatttagatgttgttacttcaaatgcacat
acgtggatgaaaaagggtggcactgcatcaccggcgggtgtattgtatttccatattcat
aacccgattgttgagatgaaaggcgatgcatctgaagaagaaattgagaaagaaatttta
aagaaatttaaaatgaaagggctcgtactaggagatgctgatgttgttcgtttaatggat
aataaactttcaacaggaagctctgatattatttctgctggtttgaaaaaagatggtagt
tttagtgcgcgttctagcattgcaagtgaacaagaatttaacgtacttcaaaaatatgta
caccactcgtttgaaaatatcggaaaagacatcacagaaggtgtcatcgatattgctcct
tacaaaaaggggaataaagcggcttgtacgttctgtaactttaaatctgtttgtcagttt
gatgaatcacttgaagataatcaattccgtacattaaaagatatgaaagatagcgaagca
atggagaaaattagagaggaggttggcggagaatga
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