Bacillus nitratireducens: GSN03_12075
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Entry
GSN03_12075 CDS
T07605
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bnt
Bacillus nitratireducens
Pathway
bnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSN03_12075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnt03019
]
GSN03_12075
03009 Ribosome biogenesis [BR:
bnt03009
]
GSN03_12075
Enzymes [BR:
bnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSN03_12075
Messenger RNA biogenesis [BR:
bnt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GSN03_12075
Ribosome biogenesis [BR:
bnt03009
]
Prokaryotic type
rRNA helicases
GSN03_12075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
RRM_ESF1
Motif
Other DBs
NCBI-ProteinID:
QUG84142
LinkDB
All DBs
Position
2376267..2377619
Genome browser
AA seq
450 aa
AA seq
DB search
MVYLKNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFV
LPILEKIDPECSDVQALIVAPTRELALQITAEIKKMLVQREDINVLAIYGGQDVAQQLRK
LKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSK
QTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAKPDALRFVMD
RDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIA
TDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIE
KTLGAPIQRQIIEQPMIKNVDENGKPVQKPAPKKSGQYRQRDSREGSRSGSKGGPRNDSR
NSSRNDNNRSFNKPSNKKSSTKQGQQRRGR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtggtctatttgaaaaactttttagaattaggaattagtgaaacttttaatcatacatta
cgtgaaaatggaattacagaagcaacaccaattcaagagaaggcaattcctgttattatg
tcaggtaaagatattattgggcaggcgaaaacaggaacgggtaaaacgttagcattcgtg
ttaccgattttagaaaaaatcgatccagagtgtagtgatgttcaggctctaattgttgcg
ccaacaagggaactagcactgcaaattacggctgaaattaaaaaaatgcttgttcaaaga
gaagatattaatgtactagcgatttatggcgggcaagatgtagcgcaacaattgagaaaa
ttaaaaggtaatacacatattgttgtagcgacaccaggacgattattagatcatatacga
cgtgaaacaattgatttaagtaatctttcaacgattgtactagatgaagcggatcaaatg
ctttatttcggtttcttatatgatattgaagatattttagatgagacacctggtagtaaa
caaacgatgttattctcagcaacgatgccaaaagatattaaaaaattggcgaaacgttat
atggatgagccgcaaatgattcaagtacaaagtgaagaagtaacggtagatacaattgaa
cagcgtgtcattgagacgacagatcgtgcaaagccagatgcacttcgttttgttatggat
cgtgatcagccatttttagcagttattttctgtcgtacaaaggttagagcaagtaagctt
tatgataatttaaaaggactaggttataattgtgctgaacttcatggtgatatacctcaa
gcgaaacgtgaaagagttatgaagagtttccgcgaagctaaaattcagtacttaatcgca
acggatgtagcagctcgtggacttgatgtagatggtgtaacgcatgtatttaactttgat
atccctgaagatgtagaaagttatattcaccgtattggccgaacaggacgtgctggtgga
tcaggtcttgcaattacgttcgttgcagcgaaagatgaaaaacatttagaagaaattgaa
aaaacgcttggtgcaccaatacaaagacaaataatcgaacaaccgatgataaaaaatgta
gatgaaaatggaaaaccggtacaaaagccggctccaaagaaatcaggtcaatatcgtcaa
agagatagccgtgaaggttcaagaagtggttcaaaaggtggtccaagaaacgattcaaga
aatagttcgagaaatgataacaatcgatcatttaataagccaagtaataagaaaagtagt
acaaaacaaggtcagcaaagacgtggccgttaa
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