Bacillus nitratireducens: GSN03_13165
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Entry
GSN03_13165 CDS
T07605
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bnt
Bacillus nitratireducens
Pathway
bnt00470
D-Amino acid metabolism
bnt00550
Peptidoglycan biosynthesis
bnt01100
Metabolic pathways
bnt01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bnt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GSN03_13165 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GSN03_13165 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GSN03_13165 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bnt01011
]
GSN03_13165 (ddlB)
Enzymes [BR:
bnt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
GSN03_13165 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
bnt01011
]
Precursor biosynthesis
Amino acid ligase
GSN03_13165 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
RimK
GARS_A
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
QUG84337
LinkDB
All DBs
Position
complement(2618067..2618981)
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AA seq
304 aa
AA seq
DB search
MRIGVIMGGVSSEKQVSIMTGNEMIAHLDKSKYEIVPITLNEKMDLIEKAKDIDFALLAL
HGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGVETPDWIELTKMED
LKLEELDKIGFPLVVKPNSGGSSVGVKIVNDKNELISMLETVFEWDSEVVIEKYIKGDEI
TCSIFDGKQLPIISIRHAAEFFDYNAKYDDVSTIEEVIELPTEIKERVNKASIACYKALK
CSVYARVDMMVKDGIPYVMEVNTLPGMTQSSLLPKSADAAGINYSKLLDMIIETSLKVRK
EEGF
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagaattggtgttattatgggaggagtttcctctgaaaaacaagtatcaattatgact
gggaatgaaatgattgcacatttagataagagtaagtatgaaatagttccaattacgtta
aatgaaaaaatggatttaattgaaaaagcgaaagacattgattttgcattgctagcatta
cacggaaagtacggagaagatggtacagttcaaggaacgctagagagtttaggtattcct
tatagtggcagcaatatgttatctagcggtatatgtatggacaaaaatatttcgaaaaag
attttgcgttatgaaggagtagaaacaccagattggattgaactcacaaaaatggaggat
ctaaagcttgaagagttagataagataggatttccgttagtggtaaaacctaactctggt
ggctcaagtgtgggagtcaagatcgtcaatgataaaaatgaattaatctcaatgctggaa
acagtatttgaatgggattccgaagtagtaattgagaagtatataaaaggtgacgagatt
acatgttcaatttttgatggtaaacagttacccatcatttcaattcgacatgcagctgag
ttttttgactacaatgcaaaatacgatgatgttagtacaattgaagaagttattgaactt
ccaactgaaattaaagaacgtgtaaataaagcgtcaatagcttgttataaagcattaaaa
tgtagtgtttatgcaagggttgatatgatggtgaaggacggaattccatatgtaatggag
gttaatacattaccagggatgacacaatcaagtttactaccaaaaagtgcagatgcggct
ggaattaattatagtaaactattagatatgataattgaaacatcattaaaagtaagaaaa
gaagaaggtttttaa
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