KEGG   Bacillus nitratireducens: GSN03_17830
Entry
GSN03_17830       CDS       T07605                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
bnt  Bacillus nitratireducens
Pathway
bnt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bnt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GSN03_17830 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bnt03019]
    GSN03_17830 (rny)
Messenger RNA biogenesis [BR:bnt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GSN03_17830 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B Golgin_A5 KH_2 DUF2844 DUF4407
Other DBs
NCBI-ProteinID: QUG85193
LinkDB
Position
complement(3532271..3533833)
AA seq 520 aa
MSSTVWILISILLATVGAVVGFFVRKSIAEAKINGATNEAKRILDEANREAEALKKEALL
EAKDEIHTLRTEAELEIRDRRSELQKQENRLMQREENLDRKDETLDKREQQLEKKEDSLV
AKQQQIEELESKVGELVQKQQTELERISNLTREQAKAIILGKVESEVSHEIAVMVKESEV
RAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIR
EVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDEKL
ARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDTID
DLEAHRLARDIRKRIENELDYPGHIKVTVIRETRAVEYAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgagtagtacagtttggatactcatctccattttgcttgcaacagtcggtgcagttgtt
ggcttttttgttcgaaagtctattgctgaagcgaagattaatggtgcaactaatgaagcg
aaacgtattctagacgaagcgaatcgtgaagcagaagcacttaagaaagaagcgctttta
gaagcaaaggatgaaattcatacacttcgtacagaagctgaattagaaattcgtgaccgt
agaagcgaattacaaaaacaagaaaatcgtttaatgcaaagagaagagaaccttgatcgt
aaagacgaaacgctcgataagcgcgagcaacagttggaaaagaaagaggattctcttgta
gcgaaacaacaacagattgaagagttggaaagcaaagtgggagagttagttcaaaagcaa
caaacagaattagagcgcatttccaatctgacacgcgaacaagcgaaagcaattattctt
ggtaaagtagaaagtgaagtttctcatgaaattgccgttatggtaaaagaaagtgaagtt
cgtgcgaaagaagaagcggataagaaagcaaaagagattttatctcttgcaatgcaaaga
tgtgcagctgatcatgttgctgaaacaaccgtttcggttgtaaatcttccaaacgacgaa
atgaagggacgtattatcggacgtgaaggtcgtaatattcgtacgctagaaacgttaaca
ggtattgaccttattatcgatgatacaccagaagcggtaattctatctggatttgacccg
attcgtcgtgaaacagctcgtatcgctcttgataaactagtacaggacggacgtattcac
ccagcgcgtattgaagagatggtcgaaaaatcaagacgtgaagtggacgagtatattcgt
gaagtcggagagcaaacaacgtttgaagtgggtgttcatggcttacatccagatttaatt
aagattttaggtcgtttaaaataccgtacaagttatggacaaaacgtcttaaaacactct
atggaagttgcatatttaactggacttatggcagcggagcttggtgaggatgaaaaacta
gcaagacgtgctggtctattacatgatatcggaaaagcaattgatcatgaagtagaaggt
agccacgttgaaattggtgttgaactcgcaacgaaatataaagagcatcctgttgtaata
aacagtatcgcatctcaccatggtgacacagaaccaacttctatcattgcagttctagtt
gcagcagcagatgcattatcagctgcaagaccgggagctcgtagtgaaacacttgagaac
tacattcgtcgtcttgaaaagttagaagaaatttcagagtcttatgaaggcgtagaaaaa
tctttcgcaattcaagcaggacgtgaagttcgtattctggtaaaaccagatacaattgat
gatttagaagctcatcgtttagctcgtgatattcgaaaacgtattgaaaatgaactggat
tatccaggacatattaaagttactgttattcgtgaaacacgtgcagtggaatacgcaaaa
taa

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