Bacillus nitratireducens: GSN03_17830
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Entry
GSN03_17830 CDS
T07605
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bnt
Bacillus nitratireducens
Pathway
bnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSN03_17830 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnt03019
]
GSN03_17830 (rny)
Messenger RNA biogenesis [BR:
bnt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GSN03_17830 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Golgin_A5
KH_2
DUF2844
DUF4407
Motif
Other DBs
NCBI-ProteinID:
QUG85193
LinkDB
All DBs
Position
complement(3532271..3533833)
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AA seq
520 aa
AA seq
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MSSTVWILISILLATVGAVVGFFVRKSIAEAKINGATNEAKRILDEANREAEALKKEALL
EAKDEIHTLRTEAELEIRDRRSELQKQENRLMQREENLDRKDETLDKREQQLEKKEDSLV
AKQQQIEELESKVGELVQKQQTELERISNLTREQAKAIILGKVESEVSHEIAVMVKESEV
RAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIR
EVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDEKL
ARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDTID
DLEAHRLARDIRKRIENELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtacagtttggatactcatctccattttgcttgcaacagtcggtgcagttgtt
ggcttttttgttcgaaagtctattgctgaagcgaagattaatggtgcaactaatgaagcg
aaacgtattctagacgaagcgaatcgtgaagcagaagcacttaagaaagaagcgctttta
gaagcaaaggatgaaattcatacacttcgtacagaagctgaattagaaattcgtgaccgt
agaagcgaattacaaaaacaagaaaatcgtttaatgcaaagagaagagaaccttgatcgt
aaagacgaaacgctcgataagcgcgagcaacagttggaaaagaaagaggattctcttgta
gcgaaacaacaacagattgaagagttggaaagcaaagtgggagagttagttcaaaagcaa
caaacagaattagagcgcatttccaatctgacacgcgaacaagcgaaagcaattattctt
ggtaaagtagaaagtgaagtttctcatgaaattgccgttatggtaaaagaaagtgaagtt
cgtgcgaaagaagaagcggataagaaagcaaaagagattttatctcttgcaatgcaaaga
tgtgcagctgatcatgttgctgaaacaaccgtttcggttgtaaatcttccaaacgacgaa
atgaagggacgtattatcggacgtgaaggtcgtaatattcgtacgctagaaacgttaaca
ggtattgaccttattatcgatgatacaccagaagcggtaattctatctggatttgacccg
attcgtcgtgaaacagctcgtatcgctcttgataaactagtacaggacggacgtattcac
ccagcgcgtattgaagagatggtcgaaaaatcaagacgtgaagtggacgagtatattcgt
gaagtcggagagcaaacaacgtttgaagtgggtgttcatggcttacatccagatttaatt
aagattttaggtcgtttaaaataccgtacaagttatggacaaaacgtcttaaaacactct
atggaagttgcatatttaactggacttatggcagcggagcttggtgaggatgaaaaacta
gcaagacgtgctggtctattacatgatatcggaaaagcaattgatcatgaagtagaaggt
agccacgttgaaattggtgttgaactcgcaacgaaatataaagagcatcctgttgtaata
aacagtatcgcatctcaccatggtgacacagaaccaacttctatcattgcagttctagtt
gcagcagcagatgcattatcagctgcaagaccgggagctcgtagtgaaacacttgagaac
tacattcgtcgtcttgaaaagttagaagaaatttcagagtcttatgaaggcgtagaaaaa
tctttcgcaattcaagcaggacgtgaagttcgtattctggtaaaaccagatacaattgat
gatttagaagctcatcgtttagctcgtgatattcgaaaacgtattgaaaatgaactggat
tatccaggacatattaaagttactgttattcgtgaaacacgtgcagtggaatacgcaaaa
taa
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