Bacillus nitratireducens: GSN03_18020
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Entry
GSN03_18020 CDS
T07605
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bnt
Bacillus nitratireducens
Pathway
bnt03030
DNA replication
bnt03430
Mismatch repair
bnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSN03_18020
03430 Mismatch repair
GSN03_18020
03440 Homologous recombination
GSN03_18020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bnt03032
]
GSN03_18020
03400 DNA repair and recombination proteins [BR:
bnt03400
]
GSN03_18020
Enzymes [BR:
bnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GSN03_18020
DNA replication proteins [BR:
bnt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GSN03_18020
DNA repair and recombination proteins [BR:
bnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GSN03_18020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QUG85230
LinkDB
All DBs
Position
complement(3572926..3577227)
Genome browser
AA seq
1433 aa
AA seq
DB search
MSLTNEQQERFQILLQQLQIPDDLINQYLQGGGIERLVIDKANKSWHFDLQVPRILPTEL
YELLETKLKQSFSHIARTTFALETENKQFTEEEVRAYWPLCTERITFSPMFAYLKKQLPQ
VNGVKLLINVNNELESTALKKNVAKPVGDQYETFGFPRFQLDTHIQQNTEEMQKFREQTQ
QEDRERVIQAMEEMAKKQAEESSVVHEGPVVLGYLIKPDEEITPMREIQDEERRKTVQGY
VFHVETKELRSGRTLLTLKITDYTDSIMIKMFSRDKEDIPMLQSLKKGMWVKARGSVQND
TFVRDLVMIANDINEITGPSRKDKAPEGEKRVELHLHTPMSQMDAVTPVSRLVAQAGKWG
HEAIAVTDHAVAQSFPEAYSAGKKAGVKVIYGVEANLVNDGVPIAYNEAHRLIAEETYVV
FDVETTGLSAVYDTVIELAAVKIKGGEIIDRFESFANPHQPLSATIIELTGITDDMLTDA
PEVDEVFKKFEEWMGDHTLVAHNASFDMGFINVGFKKAGIEKTKNPVIDTLELARFLFPE
MKNHRLNTMCKKLDIELTQHHRAIYDTEATGYLLVKMLKDVIEKGFEYHDQLNDSMGQGD
AYKRGRPSHMTLLATSDVGLKNLYKLVSYSHLNYFYRVPRVPRSLLKKYREGIIVGTACD
KGEVFEAMMQKAPEEVEEIAQFYDYIEVMPPEVLRHLVERELVRDEGQLKTIISNLVKLG
ETLEKPVVATGNVHYLEPEDAMYRKILVSSQGGANPLNRHSLPPVHFRTTDEMLECFSFL
GEDKAKEIVVTNTQKVASLIGDVHPVKDDLYTPKIEGADDETRDMSYKMARSIYGEELPE
IVEARLEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSFVATMMEITEVN
PLPPHYVCPKCKQSEFFNDGSVGSGFDLPDKECPTCNVSYVKDGHDIPFETFLGFKGDKV
PDIDLNFSGEYQPRAHNYTKILFGEDYVYRAGTIGTVAEKTAYGYVKGYANDHNLTIRNA
EIDRLVAGCTGVKRTTGQHPGGIIVVPDYMDIFDFSPIQFPADSIGAEWRTTHFDFHSIH
DNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSGPESLGVTEEQINCKTG
TLGIPEFGTKFVRQMLEETKPTTFSELVQISGLSHGTDVWLGNANELIYNGTCTLSEVIG
CRDDIMVYLIYQGLDPSLAFKIMESVRKGKGVPEEWEEDMKNNNVPGWYIDSCKKIKYMF
PKAHAAAYVLMAVRIAYFKVHFALLFYAAYFTVRADDFDVEAMAKGSASIRVKIDEIAQK
GLDAAPKEKSLLTVLEMTLEMCERGYSFQKVDLYRSHATEFIIDGDSLIPPFNAVPGLGT
NAALSIVEARKNGDFLSKEDLQQRSKVSKTIIEYLDSQGCLGDLPDQNQLSLF
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaacaaatgaacaacaagagcgatttcaaattttgctccagcagttgcaaata
ccagacgaccttataaatcaatatttacaaggtggtggtattgaaaggctcgttattgat
aaagcgaataaaagttggcattttgatttacaagtgccacgtattttgcctacagaatta
tatgaattgctagaaacaaagcttaagcaatcattttctcatattgcaagaacaacattt
gcattagaaacagagaataaacaatttacagaagaagaagtgagggcgtattggccgctt
tgtacggaacgaattacattttcacctatgtttgcgtacttaaagaagcagcttccgcag
gtgaatggagtgaagttgctaataaatgtgaataatgagctggaatctactgctttaaag
aaaaacgtagcgaaaccagtaggggatcaatacgaaacttttggattcccgcgttttcag
ttagacacacatatacagcaaaatacagaagaaatgcaaaagtttcgcgagcaaacgcag
caagaagatcgtgaacgtgttatacaagctatggaagaaatggcgaagaagcaagctgaa
gaaagcagcgttgtgcatgaagggccggttgtactcggatatcttattaagccggatgaa
gagattacaccgatgcgagaaattcaagatgaagaaagaagaaaaacggtccaaggatat
gtcttccatgtagaaacgaaagagcttcgtagtggccgtacgttattaactttaaaaata
acagactatacggattcaattatgatcaaaatgttctcgcgtgacaaagaagatattcca
atgctgcaatccttgaaaaaaggaatgtgggtgaaagcgcgtggttctgttcaaaatgat
acattcgttcgagatttagtaatgattgcaaatgatataaatgaaataacaggaccgtct
cgtaaagataaagcgccagaaggtgaaaaacgtgtagagctgcatcttcacacaccgatg
agccaaatggacgctgttactcctgtttctagacttgttgcccaagcaggtaaatgggga
catgaggcaattgctgttacagaccatgctgttgcgcagtctttcccagaggcatattct
gcgggtaaaaaggctggggttaaagttatatatggtgtagaagcgaatttagttaatgat
ggtgtaccgattgcatataacgaagcgcatcgtttaattgcagaggaaacgtatgttgtt
ttcgacgttgagacgacaggtttatcagctgtgtatgacacagtcattgagttagctgcc
gtaaagataaaaggcggcgaaatcattgatcgctttgaatctttcgcaaatccacatcaa
ccattatctgcaacaattattgaattaacaggtattacagatgatatgttaactgatgct
ccagaagtggacgaagtgttcaaaaagtttgaggaatggatgggtgaccatacacttgtt
gcccataacgcaagctttgatatgggctttattaacgtaggttttaaaaaggccgggata
gaaaaaacgaaaaacccagttattgatacgttagaacttgcacggttcttattcccagaa
atgaaaaatcatcgattaaatacaatgtgtaaaaagcttgatattgaattaacgcaacat
caccgtgcgatttatgatacagaagcaacgggatatttacttgtgaaaatgttaaaagat
gtgattgaaaagggatttgaatatcacgatcaactaaacgatagtatggggcaaggggat
gcatataaacgtgggcgtccaagtcatatgacattacttgccacatcagacgttggatta
aaaaatttatataaacttgtttcatattctcatctgaattacttttaccgtgtaccacga
gtgccaaggtctttattaaaaaaatatcgtgaaggcattatagtagggacggcttgtgat
aaaggtgaagtgtttgaagcgatgatgcaaaaagcacctgaagaagtagaagaaattgca
cagttttatgactatattgaggttatgcctccagaggtgttacgtcatttagtagaacgt
gaactcgttagagatgaaggtcaattaaaaacaattatttctaatttagtaaaactaggt
gagacgttagaaaaaccagttgttgctacagggaacgtgcattatttagagccagaggat
gcaatgtatcgtaaaattttagtaagttcgcagggcggagcaaatccgttaaatcgacat
tctttaccgcctgtacatttccgtacaacagatgagatgttagagtgtttttcattttta
ggtgaagacaaagcgaaagaaattgtagtaacgaatacacaaaaggttgcgtcattaatt
ggtgatgttcatccagtaaaagatgatctatacacaccgaaaattgagggtgccgatgat
gaaacgcgtgatatgagttataaaatggcacgtagcatttatggggaagagctaccagaa
attgtagaggctcgtttagaaaaagaattgaaaagtattattggacatggattcgccgtt
atttatttaatttcacataagcttgtgaaaaaatcgttagtagacggatatctagtaggt
tcgcgtggatcggtagggtcatcatttgttgcaacgatgatggaaattacagaagtaaat
ccattaccaccgcattacgtatgtccaaagtgtaagcaatcagaattctttaatgacggt
tctgtaggttctggttttgatttaccagataaagaatgtccaacgtgtaatgtgtcatac
gtaaaagatggacatgatattccgttcgaaacgttccttggatttaaaggagataaggtg
cccgatatcgatttgaacttctccggggaatatcaaccacgtgcccataactatacgaaa
atactgttcggtgaagattatgtataccgtgcgggaacgataggtacagttgcggaaaaa
accgcttatgggtatgtaaaaggttatgcgaatgatcataatttaacgattcgaaatgca
gagatagatcggttagttgcaggttgtacaggggtaaaacgtacaactggacagcatcca
ggcggtattattgtagtaccagattacatggacatatttgatttctcaccaatacagttt
ccggcggattcaataggggctgagtggagaacaacgcactttgatttccactcgattcat
gataatttattaaaacttgatatacttggacacgatgatccgaccgttattcgtatgtta
caagatttaagtggtattgatccaaaaacaataccaacggatgatccagaagtgatgaaa
attttctctggtccagaatcgttaggggtaacggaagaacaaatcaactgtaaaacaggt
acacttggtataccagagtttggtacgaaattcgtaagacaaatgttagaagagacaaaa
ccaacgacattctcagagttagtccaaatctctggactatcacatggtactgacgtatgg
ctcggtaatgcaaacgagttaatttataatggtacatgtacactgagtgaggttattggt
tgtcgtgatgacatcatggtatatttaatttatcaaggtttagatccatcattagccttc
aaaatcatggagtcagttcgtaaaggtaaaggtgtaccggaagaatgggaagaggacatg
aaaaataataatgtaccaggttggtatattgattcatgtaagaagattaaatacatgttc
cctaaagcccatgcggctgcttacgtacttatggctgtacgtatcgcgtactttaaagtg
cattttgcacttttattctatgcggcatattttacagttcgtgcagatgattttgatgta
gaagcgatggcgaaaggttcagcatccatacgcgtaaaaattgacgaaattgctcaaaaa
ggattggatgcagcgccgaaagagaagagtttattaactgtactagaaatgacacttgaa
atgtgtgagcgtggatactcattccaaaaggttgatttataccgctcgcatgcaacagaa
tttattattgatggagactcattaattcctccatttaatgcagtgcctggtcttggtaca
aacgcagctttaagtattgtagaagcacgtaaaaatggagacttcctatcaaaagaagac
ttacagcagcgcagtaaggtttcaaaaacaattattgagtatttagatagtcaaggttgt
ctaggagatttaccggatcaaaaccaattatcactgttctaa
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integrated database retrieval system
