Bacillus nitratireducens: GSN03_18095
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Entry
GSN03_18095 CDS
T07605
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bnt
Bacillus nitratireducens
Brite
KEGG Orthology (KO) [BR:
bnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bnt03032
]
GSN03_18095 (topA)
03400 DNA repair and recombination proteins [BR:
bnt03400
]
GSN03_18095 (topA)
Enzymes [BR:
bnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GSN03_18095 (topA)
DNA replication proteins [BR:
bnt03032
]
Prokaryotic type
DNA Topoisomerases
GSN03_18095 (topA)
DNA repair and recombination proteins [BR:
bnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GSN03_18095 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
SAND
Toprim_3
Toprim_2
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
QUG85245
LinkDB
All DBs
Position
complement(3591843..3593921)
Genome browser
AA seq
692 aa
AA seq
DB search
MSDYLVIVESPSKAKTIEKYLGKKYKVVASMGHVRDLPKSQMGIEVKNNFTPKYITIRGK
GPVLKDLKSAAKKAKKVYLAADPDREGEAIAWHLANTLNVDVESDCRVVFNEITKDAIKE
SFKHPRAINMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIERET
EIQNFEPEEFWTIKTEFVKGKDTFEASFYGVDGEKVQLTNEEQVNEIIEKMKDNAFSVEN
VTRKERKRNPALPFTTSSLQQEAARKLNMRAKKTMMLAQQLYEGIDLGKQGTVGLITYMR
TDSTRISETAQTEARTYITESFGAEYIGTEKKKETKKSNAQDAHEAIRPTSVMRKPEELK
SFLGRDQLRLYKLIWERFVASQMASAIMDTVTARLINNNVQFRASGSVVKFPGFMKVYVE
SKDDGAEEKDKMLPPLEVGETVFSKDIEPKQHYTQPPPRYTEARLVRTLEELGIGRPSTY
VPTLETIQKRGYVGLDNKRFVPTELGGIVIELILEFFPEIINIEFTANMEQSLDEVEEGN
ANWVKIVDDFYVGFEPRLEKAEKEMREVEIKDEPAGEDCELCEHPMVFKMGKYGKFMACS
NFPDCRNTKPIVKEIGVTCPKCDKGQIIERRSNKKKRLFYGCGTYPECDFVSWDKPIGRK
CPKCEGMLVEKKLKKGVQVQCISCDYEEEQQM
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattacctcgtaatcgtggagtcgccttctaaggcgaagaccattgagaaatat
ttagggaaaaaatacaaagtcgttgcgtccatgggacatgttcgcgatttacctaaaagc
caaatggggatagaagtaaagaataacttcaccccgaagtatattaccattcgtggtaaa
ggtcccgttttaaaagatttaaaatcagcggcaaaaaaagcaaagaaagtctatctcgcg
gccgatccagaccgtgaaggggaagcaattgcttggcatttagcgaatacgttaaatgtg
gacgttgaatcagattgccgagtggtatttaatgagattacaaaagatgcaataaaagaa
tcatttaaacatcctcgggcaattaatatggatttagtagatgcgcaacaagcaaggcgt
atactcgatcgtcttgttggttacaatattagtcctttattatggaagaaagtaaaaaag
ggattaagtgcaggacgcgtacaatctgtagcagttcgtctaattatcgaacgtgaaaca
gaaattcaaaactttgaacctgaagaattctggacaattaaaacagaatttgtgaaaggt
aaagacacatttgaagcaagcttttacggtgtagatggtgaaaaagttcaattaacgaac
gaagaacaagtgaacgaaataatcgaaaagatgaaagataatgcgttttcggttgaaaat
gtaacgcgaaaagagcgaaagcgtaatccggcattaccgtttacaacatcttccttgcaa
caagaagctgcacgtaaattaaatatgcgagcaaagaaaacaatgatgcttgcgcagcaa
ttgtatgaagggatagatcttggaaagcaagggactgtaggtcttattacgtatatgaga
accgattcaacaaggatctcagaaacagctcaaacagaggctcgtacttatattacagag
tcgttcggtgcggaatacatagggacagagaagaagaaagaaacgaaaaagtcgaatgca
caagatgcgcatgaggcgattcgtcctacttcggtaatgagaaagccagaggaactaaaa
agtttcttaggtcgtgatcaactacgtttgtataaactgatttgggagcgatttgttgca
agtcaaatggcatctgctataatggatactgttacagcgagactcattaataacaatgtt
cagttccgtgcaagtggatcggttgtaaagttcccaggatttatgaaagtgtatgtagag
tcgaaagatgatggtgcggaagaaaaagataaaatgttgccacctttagaagtaggggaa
actgtattttcaaaagatatagaaccgaagcaacattacacacaacctccgccacgttat
acagaggctcgtctagtaagaacacttgaagaacttggaattgggagaccatctacatat
gtaccgacacttgaaacgattcaaaaacgtggatacgttggtttagataataaacgcttc
gttccgactgaacttggtggaatagtaatcgaacttattttagagtttttcccggaaatt
attaacattgaatttactgccaatatggagcaaagccttgatgaagtagaagaaggaaat
gcgaattgggtgaaaattgttgatgatttctacgtaggatttgaaccgcgcttagagaaa
gcggaaaaagaaatgcgtgaagtggaaattaaagatgaaccagctggggaagactgtgaa
ttatgtgagcacccaatggtctttaaaatgggtaaatacgggaagtttatggcatgttcg
aatttccctgattgtcgtaatacaaagccgattgtgaaagaaatcggtgtgacttgtccg
aagtgtgataaaggacaaattattgaacgtcgaagtaataaaaagaaacgtcttttctat
ggatgcggtacgtatccagagtgtgactttgtatcttgggataagccgattggccgtaaa
tgtccgaagtgcgaaggtatgcttgtagagaagaagttgaaaaaaggcgtgcaagtacaa
tgtatttcgtgtgattatgaagaagaacaacaaatgtga
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