Bacillus nitratireducens: GSN03_20410
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Entry
GSN03_20410 CDS
T07605
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bnt
Bacillus nitratireducens
Brite
KEGG Orthology (KO) [BR:
bnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnt03019
]
GSN03_20410
03009 Ribosome biogenesis [BR:
bnt03009
]
GSN03_20410
Enzymes [BR:
bnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSN03_20410
Messenger RNA biogenesis [BR:
bnt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GSN03_20410
Ribosome biogenesis [BR:
bnt03009
]
Prokaryotic type
rRNA helicases
GSN03_20410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Microtub_bd
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QUG85690
LinkDB
All DBs
Position
complement(4008597..4009907)
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AA seq
436 aa
AA seq
DB search
MTLQTFTQYDFKPFLIDAVRELRFSEPTGIQQKIFPVVKKGVSVIGQSQTGSGKTHAYLL
PTLNRIDASREEVQLVITAPTRELAQQIYEEIVKLTKFCAEDQMITARCLIGGTDKQRSI
EKLKKQPHIVVGTPGRIKDLVEEKALFVYKANTIIVDEADLMLDMGFIQDVDKIAGRMPK
NLQMLVFSATIPQKLKPFLKKYMENPEHIHINPKQVAAGNIEHYLVPSRHRNKIELVKNM
LLQFKPYLAIVFTNTKKKADEVADGLAERGLKVGRIHGDLSPRDRKKMMKQVRDLEFQYI
VATDLAARGIDIEGISHVINYELPSDLDFFVHRVGRTARAGHSGIAVTIYDPANEEALDS
LEKQRHIEFKHVDLRGDEWADLGDRRRRKSRKKPNDGLDVMATKVVKKPKKVKPNYKRKL
ATERDKVKRKYSNKKR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacactacaaacttttacacagtatgattttaaaccatttttaatagatgcagttcgt
gaactacgcttttcagagccgacaggaattcaacagaaaattttcccggttgtgaaaaaa
ggtgtgagtgtaattggacaatcccaaacaggttctgggaaaacacatgcatacttactt
cctacattaaacagaattgatgcaagtcgtgaagaagtacaacttgttattacagcgcct
actcgtgagttagcacaacaaatttacgaagaaatcgtgaaattaacaaagttctgtgca
gaagatcaaatgattacagcacgttgtttaattggtggaactgataaacaacgatcaatt
gaaaagttgaaaaaacaacctcatattgtagttggaacaccaggacgtattaaagactta
gtagaagaaaaagcgttatttgtttataaagcaaatactattattgtcgatgaagcagac
ttaatgcttgatatgggattcattcaagatgtagataaaattgcaggacgtatgcctaaa
aacttacaaatgctagttttctctgcaacaattcctcaaaaattaaaaccgtttttgaag
aaatatatggagaatccagagcatattcatattaatccgaaacaagttgcagcaggaaat
attgagcattatcttgtgccttcaagacaccgtaataaaattgaattagtgaaaaatatg
ctacttcaatttaaaccgtacctagcaattgtgtttacaaacacaaagaagaaggctgat
gaagtagccgatggattagcagaacgtgggttaaaagtagggcgtatacacggtgattta
tcaccacgtgatcgtaaaaaaatgatgaaacaagttcgtgatttagagttccaatatatt
gttgcaacagatttagcagcacgcggtattgatattgaaggaattagtcatgttattaac
tatgaacttccatcagatttagatttcttcgttcaccgtgttggaagaactgcacgtgcg
ggtcattcaggtattgcagtgacaatttatgatccagcaaatgaagaagcgttagatagt
ttggaaaaacaacgtcatatcgagtttaagcatgtagatttacgcggagatgagtgggcg
gatttaggtgaccgtcgtcgtcgtaagagccgtaaaaaaccaaatgatggactagatgtt
atggcaacaaaagttgttaaaaagccgaagaaggtaaaaccaaactataaacgaaaactt
gcaacagaacgtgataaagtgaagagaaaatatagcaataaaaaaagataa
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