Candidatus Bandiella numerosa: N3Z17_01765
Help
Entry
N3Z17_01765 CDS
T09014
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bnu
Candidatus Bandiella numerosa
Brite
KEGG Orthology (KO) [BR:
bnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bnu03032
]
N3Z17_01765 (topA)
03400 DNA repair and recombination proteins [BR:
bnu03400
]
N3Z17_01765 (topA)
Enzymes [BR:
bnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N3Z17_01765 (topA)
DNA replication proteins [BR:
bnu03032
]
Prokaryotic type
DNA Topoisomerases
N3Z17_01765 (topA)
DNA repair and recombination proteins [BR:
bnu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N3Z17_01765 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
Zn_ribbon_Top1
Toprim_4
RecG_N
Motif
Other DBs
NCBI-ProteinID:
WHA05260
LinkDB
All DBs
Position
363143..365464
Genome browser
AA seq
773 aa
AA seq
DB search
MKLLIVESPAKAKTLEKYLGKDYKVISSYGHVRSLPSVKDAVEPDNNFKITYKVLEKAKD
TIKKLSENFKRADAIFLATDPDREGEAISWHVLETMKSKKSINKGVEIKRIVFHEITKNA
VINAIENPRKLDENLVRAQQARQALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALKLLCE
RENERDKFKEQEYWSIDSIFQNEDKVNFDSQLHIYDGKKIEKLSITNEKYAKEIVKNVEK
LKYAVSSVKTKEMSRKPTAPFITSTLIQEASRKLNFTAQKTMLIAQKLYEGIQINGEVEG
LITYMRTDGVTISNEAIKNIVSHIKNHYGPNYLPSTPIIYKSKSKNAQEAHEAIRPTGFQ
NTPSDVKEFLDNDQYRLYELIWKRTIASQMANAKLESVTVEISSQNSKNIFKSVGSTLVF
DGFYKVYKEGQDNEQDESRNKIPKLKAGDNLELNKVTPNQHFTQPPPRYTEASLVKRMEE
LGIGRPSTYPKIISILIEREYAKIMQKSFIPESKGRLVDAFLNKFFNKYIDYDFTANLEN
ELDDIANGKKDWKEVLTNFWSLFKSTSNEVLEIKNMDVINEVENLLVDYIFKSDGAEDIE
SLRKCGKCKDGKLGLRTGKFGAFIGCSNYPECNNKKMLFGDEPLDDASSNEKILGIDAKT
QVNILLKKGPYGFYLEKEEDGKKKRASLPAKYPHEDIGLEFASNLLNLPKAIGKHPSINE
DIFVKIGRYGPYLECNKKFYALKNIDKIDINLSEATALIDNYKPKVMKRKKKG
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacttatagttgaatctcctgcaaaagcaaaaactttagagaaatatttgggt
aaagactataaagtaatttcttcatatggtcatgtaaggagtttgccatctgtcaaagat
gcggtggaaccagataataattttaaaattacctataaagtgcttgaaaaggcaaaagat
acaataaaaaaactttctgaaaattttaaaagggcagatgctatttttctagcgactgac
cccgatagagaaggagaggcaatttcgtggcatgttttagagacaatgaaaagtaaaaaa
tctattaataagggtgtagagataaaaagaattgtatttcatgaaataacaaaaaatgct
gtcataaatgccatagaaaatccaagaaaattagatgagaatttagtgcgcgcacaacag
gcgaggcaggcactagattatttagttggatttactttatctcctgttttatggagaaaa
ttaccgggcagtagatctgcaggaagagtgcaatcagttgctctaaagctactatgcgaa
agagaaaatgaaagagataaatttaaagagcaagaatattggtcaatagattctatattt
caaaatgaggacaaagttaattttgattctcaacttcatatctatgatggtaaaaaaatt
gaaaaacttagtataacaaatgagaaatatgctaaggaaatagtaaaaaatgttgaaaag
ctgaaatatgcagtttcttccgttaagactaaggagatgagcagaaagcctacagctcca
tttattacttcaactttaatacaagaagcttccagaaaattaaattttactgcacaaaaa
acaatgttgattgcgcaaaagctttatgaaggcattcaaattaatggcgaagttgaaggt
ttaatcacttatatgaggactgatggtgttacaatatcaaatgaagctattaagaatatt
gtctcccacataaaaaatcattatggtccaaattatttaccttcaactcctattatttat
aaatcaaaatctaaaaatgctcaggaagctcatgaggcaattagaccaactggttttcaa
aacactcctagtgatgtaaaagaatttttggataatgatcaatacagattatatgaacta
atttggaagagaacaattgcaagccaaatggctaatgccaaattagagtctgttactgta
gaaatatcatctcaaaatagtaaaaatatattcaaatctgtaggttccactcttgtattt
gatggattttacaaggtatataaagaaggtcaagataatgaacaggatgaaagcagaaat
aaaattccaaaacttaaagctggagataatttagagcttaataaagttactcctaatcag
cattttacacaacctccgccaagatacactgaggcaagccttgtaaagagaatggaggaa
ttaggaataggtagaccttctacatatcctaaaatcatttcgatattaatcgaaagggaa
tacgctaaaatcatgcaaaaaagctttataccagaatctaaaggaaggcttgtcgatgct
tttctcaataaattttttaataagtatatagattatgatttcacagcaaatttagaaaat
gagttagacgatatagcaaatggaaaaaaagactggaaggaagtattaacaaatttttgg
tctctattcaaaagtacatccaatgaggttttggaaataaaaaatatggatgtaattaat
gaagttgaaaatttattagtagattacatttttaaatctgatggcgctgaggatattgag
agtttaagaaaatgtggtaaatgtaaagatggaaaattggggttaagaacaggaaaattt
ggagcatttataggttgttcaaactatccagaatgtaataacaaaaaaatgttatttgga
gatgagcctctagatgatgcaagtagtaatgagaaaattttaggaatagatgcaaaaact
caagttaatatattactcaaaaaaggtccatacggattttatttagagaaggaagaggat
gggaaaaaaaagcgtgcatcacttcctgccaaatatccgcatgaggatattggtttagaa
tttgcatccaatttactaaatttaccaaaagctataggaaaacacccatctatcaatgag
gatatatttgtaaaaattggcagatatggtccatatttagaatgtaataaaaaattctat
gctttaaaaaatatcgataaaattgatattaatctgagcgaagcaacagcgcttattgat
aattataaacctaaagttatgaaaaggaagaaaaagggataa
DBGET
integrated database retrieval system
