Candidatus Bandiella numerosa: N3Z17_02480
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Entry
N3Z17_02480 CDS
T09014
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bnu
Candidatus Bandiella numerosa
Brite
KEGG Orthology (KO) [BR:
bnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bnu03016
]
N3Z17_02480 (truB)
Enzymes [BR:
bnu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
N3Z17_02480 (truB)
Transfer RNA biogenesis [BR:
bnu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
N3Z17_02480 (truB)
Prokaryotic type
N3Z17_02480 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WHA05396
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All DBs
Position
complement(507117..507992)
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AA seq
291 aa
AA seq
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MNGWLLVDKPIGITSFQAINRFKKLLNVKTGHCGTLDPFASGFLLVALGKATKLVDYVMN
FEKNYTFTVKWGISTDSDDLTGNITGNSKIIPTEQQIISKLEYFVGEIEQVPPIFSAVKV
NGKRAYEYARKGEELTLKSKKVSLKKFSLESHKNDLSTFNIITSKGFYVRALARDFAKSL
NTLAHVVELRRNQSGIFANMEMINAEITKEFLHNSELYDYISARILPLDYVLDDIPVYNL
DSSDAKKLKNGQSIFHKLSLENDSRIAVKSNDTLIALCTYVNSYLKPTKTF
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaacggatggcttttagtagataagccaattgggattacatctttccaggcaattaat
aggtttaaaaaattgcttaatgttaaaacggggcactgtggaactcttgatccatttgcc
tcgggttttttgttagtagcgcttggtaaagcaactaagttggttgattatgtgatgaat
tttgaaaaaaattatacctttacggttaaatggggtatttcaactgatagtgacgacttg
actggcaatattacaggaaatagtaaaattatccctacagagcaacaaattataagtaaa
ttagaatattttgtaggcgagattgagcaggtacctccaatattttccgctgttaaggta
aacgggaaaagggcatatgaatacgcaagaaaaggtgaggaattaactttaaaatcaaaa
aaagtctctttaaagaaattttctttagaatcacataaaaatgacttaagtacatttaat
attatcacaagcaaaggattttatgttagagcgcttgctagagattttgcaaagtcatta
aatacgctggctcatgtagtggaattgagaagaaatcaaagtggaatttttgcaaatatg
gagatgataaatgcggaaataacaaaagaattcttgcataatagcgaattatatgattac
atatctgcaagaattctgcctctggattatgtgctagacgacatccctgtgtataatctg
gattcaagtgatgctaaaaaattgaaaaatgggcaatctatttttcataaattatcgctt
gagaatgattcaaggatagctgttaaaagtaacgatacgttaattgcgttgtgtacatac
gttaatagttatttaaaaccaacaaaaacattttaa
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