Candidatus Bandiella numerosa: N3Z17_03085
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Entry
N3Z17_03085 CDS
T09014
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bnu
Candidatus Bandiella numerosa
Pathway
bnu00260
Glycine, serine and threonine metabolism
bnu00630
Glyoxylate and dicarboxylate metabolism
bnu00670
One carbon pool by folate
bnu00680
Methane metabolism
bnu01100
Metabolic pathways
bnu01110
Biosynthesis of secondary metabolites
bnu01120
Microbial metabolism in diverse environments
bnu01200
Carbon metabolism
bnu01230
Biosynthesis of amino acids
bnu01240
Biosynthesis of cofactors
bnu04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bnu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
N3Z17_03085
09102 Energy metabolism
00680 Methane metabolism
N3Z17_03085
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
N3Z17_03085
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
N3Z17_03085
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
N3Z17_03085
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
N3Z17_03085
Enzymes [BR:
bnu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
N3Z17_03085
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
HTH_6
Motif
Other DBs
NCBI-ProteinID:
WHA05506
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All DBs
Position
complement(634953..636221)
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AA seq
422 aa
AA seq
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MESTFFYKNLSQSDRTVKEYIDYELHRQQSSIELIASENIVSKAVLEAQGSILTNKYAEG
YPGKRYYGGCEFVDKIENLAIERVKKLYSANFANVQPHSGSQANQAAFFALLKGGDKIVS
LSLDCGGHLTHGSKVNLSGKWFDIEHYFVDKETFELDYNEIEKLVKQAKPKLIIAGGSAY
PRKIDFAKFRQIADLVGAYLLVDMAHISGIIAAGYHQNPIEYAHVVTSTTHKTLRGPRGG
IILTNHEDIFKKINSGIFPGIQGGPLMHVIAAKAVAFGEALQPSFKNYINQVLLNANTLA
SELLNRGYNVITGGTDTHLLLVDLRKQGITGKLAEESLEKVGLTCNKNGIPFDDAKPFIT
SGIRLGTAAATTRGFKEDEFTLTASLIADILDDLAKNTEVNVLTKNATLEKVLSLCKKFP
IY
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggagagtactttcttttataaaaatttatcacaatcagacagaacggttaaggaatac
attgattacgagttacacaggcagcaaagctcaattgagctcattgcatcagaaaatata
gtcagtaaggcagtacttgaagctcaaggctcaattcttaccaacaaatatgctgagggc
tatcctggcaaacgttattatggtggatgcgaatttgttgataaaattgaaaatctggct
atagaaagagttaaaaaactgtattctgctaattttgcaaatgttcaaccacattctgga
tctcaagcaaatcaagcagcattttttgccttactaaaaggtggggataaaattgttagt
ctatctttagactgtggtggccatctcacacatggctcaaaagttaacttatctggcaaa
tggtttgatatagaacactattttgtggataaagaaacgtttgagctagattataatgaa
atcgaaaaacttgttaaacaagcaaagccaaaattaattatagctggcggctcggcatac
ccaagaaaaattgactttgctaaatttagacaaatagcagatttagttggggcttattta
ctagttgatatggcgcatatttcaggcataatagcagcaggatatcatcaaaaccctatt
gaatatgcacatgttgtaacatctaccacccataaaacactaaggggcccaagaggcggt
attatattgactaaccacgaagacatttttaaaaaaattaattctggcatatttcctgga
atacaaggcggtccattaatgcatgtcatagctgcaaaagcagttgcattcggtgaagca
ttacaaccatcattcaaaaattatatcaatcaggttttactcaacgctaatacgttagca
tcagaattattaaatagaggctataatgttataactggtggaacagacactcatcttttg
cttgttgatttaagaaaacagggaattacagggaaacttgcagaggaatctctggaaaaa
gtaggattaacttgcaacaaaaatggcattccttttgatgatgctaagccatttatcact
tctggcattagactcggcactgctgccgctacaacaaggggctttaaagaagatgaattt
actttaacagctagcttgattgcagatattcttgatgatttagctaaaaataccgaagta
aatgtattaactaaaaatgcaacacttgaaaaagtgttgagtttatgtaaaaaatttccc
atctattaa
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