Candidatus Bandiella numerosa: N3Z17_03420
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Entry
N3Z17_03420 CDS
T09014
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bnu
Candidatus Bandiella numerosa
Pathway
bnu03420
Nucleotide excision repair
bnu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N3Z17_03420
03430 Mismatch repair
N3Z17_03420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bnu03400
]
N3Z17_03420
Enzymes [BR:
bnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N3Z17_03420
DNA repair and recombination proteins [BR:
bnu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N3Z17_03420
MMR (mismatch excision repair)
Other MMR factors
N3Z17_03420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
AAA_12
AAA_11
PcrA_UvrD_tudor
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
WHA05568
LinkDB
All DBs
Position
712163..714322
Genome browser
AA seq
719 aa
AA seq
DB search
MENSKGGYLSELNDNQLEAVSHINGPLLILAGAGTGKTKVLTSRIIHILNNNIAFPSQIL
AVTFTNKAANEMKQRVDKFLENVTSSMNIGTFHSIAAKILRRHAELLGYTSGFTIINQDD
QLRVTKQLIKDYNLDEKSVSPKVLLYYINRFKDRAIIPENVSANEAEHFALGKLNKLYTE
YQNRLKNFNAMDFGDLLLNNIQLFNNNLDICLYYQNKFKYILVDEYQDTNIAQYLWLRTL
SQNNNNICCVGDDDQSIYAWRGAEITNILRFDKDYPNAKVVRLEKNYRSTQHILNLASKL
IANNTNRHSKNLWTDRTDGDKVKVINYYDDKEEARAIADEIDMLERLKKTTLSDIAILVR
AGYQTRNFEESLNFLGVPYRIVGSTKFYDRLEIKDCIGYIRLLVNKNDNLAFERVVNTPK
RGVGNSALMGVLNVAKEQNISMFDAAKGIIGEKKVKGKAIESLNHFITLIEESNSNLGVG
NHAGVVKVLLNKAGYIDMWKNDDRHESRERIDNINELINSLSEYENLQEFLEYISLISDA
DNVAEDNRVNIMTIHAAKGLEFDTVFLPGWEEGVFPSSKSIEEKKESGLEEERRLAYVAI
TRAKRNLSISYACYRRIYGDFQASEISRFVNELPKDSYQLVNNYFNSSLASAQKNAISFK
DVRKENYKPVKKEKFSVGTKVLHIKFGRGIVLSAEGDIKEIFFEKEGVKKIMSEFLELI
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattctaaagggggttatttatcggaattaaacgataatcagttagaggctgtt
tcacatataaatggccctttgctaattttagctggggcaggaactggcaaaacaaaagtt
ttaacctcaagaattatacatattttaaataataatattgcatttccatcgcaaatcctt
gctgttacattcaccaacaaggcggctaacgaaatgaagcaaagagttgataaattttta
gaaaatgtaactagctcgatgaatataggcacttttcattctatcgcagcgaaaatttta
aggcgtcatgcagaattattaggttacaccagtggttttactatcataaatcaagacgat
caattaagagtaactaagcaattgattaaggattataaccttgatgaaaaaagcgtttct
ccaaaggttttgctttattatattaataggtttaaagacagggcaataattcctgaaaat
gtatcagctaatgaggctgagcactttgctttaggcaagttaaataaattatacactgaa
tatcaaaataggttaaaaaatttcaatgctatggattttggagatctacttttaaataac
attcagctttttaacaataatttagatatatgtttatattaccaaaataaatttaaatat
attttagttgatgaatatcaggatactaatattgcgcaatatttatggctgagaacctta
tctcaaaataacaataatatttgctgtgttggggatgatgatcaatctatatatgcatgg
agaggggcagaaattacaaatattttaagatttgacaaagattatcctaatgccaaggta
gtaagacttgaaaaaaactatcgttctactcagcatattttgaatttagctagcaagtta
attgctaataatacaaataggcattctaagaatttatggactgataggacagatggggat
aaggtgaaagtcataaattattatgatgataaggaggaagcaagggctattgcagatgaa
attgatatgctagaaaggctaaaaaaaacaacgctctctgatatagcaattttagtgaga
gcagggtatcaaacaagaaattttgaagagagtttgaattttttgggagttccatataga
atagtaggcagcaccaaattctacgatagattggaaataaaagattgcataggttatata
agacttctcgttaataaaaatgataatttagcatttgaaagagttgttaacactcctaaa
agaggtgttggaaatagtgctcttatgggcgttttaaatgttgctaaagaacagaatatt
tcaatgtttgatgctgcaaaaggaataattggtgaaaaaaaagttaagggaaaggcaatc
gaatcgctcaatcattttattaccttaattgaggaaagtaatagcaatttaggagttggt
aatcatgctggtgttgtcaaagttttattgaataaagctggatacattgatatgtggaaa
aatgatgataggcatgaatctagggagaggatcgataatattaatgaattaattaatagt
ttaagtgaatatgaaaatttacaagaatttttggagtacataagcttgataagtgatgca
gacaatgttgccgaagataatagggtgaacattatgactattcatgctgctaaaggttta
gaatttgatacagtatttttgccaggctgggaagagggtgtttttcctagctcaaaatca
atagaagaaaagaaggaatcagggttagaagaagaaagaagattggcatatgtggcaata
acaagagcgaaaagaaatctctcaatttcgtatgcgtgctatagaaggatatatggagat
tttcaggcttcagagatatcaaggtttgttaatgaactgccaaaagatagttatcaactg
gtaaataactactttaatagttcattagcttcagcacaaaaaaacgcaatatcatttaaa
gatgtcaggaaagaaaattacaaaccagtaaaaaaagaaaaatttagtgttgggacaaaa
gtattgcatataaaatttggcaggggaattgttttatctgctgaaggagatataaaagaa
atattttttgaaaaagagggagtgaagaagataatgtcagaatttttagaattaatttag
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