Candidatus Bandiella numerosa: N3Z17_06450
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Entry
N3Z17_06450 CDS
T09014
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bnu
Candidatus Bandiella numerosa
Pathway
bnu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
N3Z17_06450 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bnu03400
]
N3Z17_06450 (ruvB)
Enzymes [BR:
bnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N3Z17_06450 (ruvB)
DNA repair and recombination proteins [BR:
bnu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N3Z17_06450 (ruvB)
RecFOR pathway proteins
N3Z17_06450 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
RuvB_C
AAA_lid_4
AAA
AAA_5
RNA_helicase
Mg_chelatase
AAA_14
nSTAND3
ResIII
NB-ARC
NTPase_1
Rad17
AAA_16
bpMoxR
AAA_3
TIP49
AAA_2
DUF815
Sigma54_activ_2
AAA_22
Bac_DnaA
MCM
TsaE
AAA_18
ABC_tran
NACHT
NPHP3_N
Viral_helicase1
AAA_17
AAA_28
AAA_33
AAA_PrkA
AAA_7
Parvo_NS1
MMR_HSR1
Torsin
IstB_IS21
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WHA04854
LinkDB
All DBs
Position
1350793..1351818
Genome browser
AA seq
341 aa
AA seq
DB search
MEIKGSEIIRDKVNIDDINEVSIRPSKLEEFIGQEKIIQNLKVFIGAAQFRNESLDHVLF
HGPPGLGKTTLAQIIAKEVNSNIKITSGPMLSKTRDLAAVLTNLEENDILFIDEIHRMAS
SVEEVLYPAMEDFYIDLIIGDGPAARTVKINLPKFTLVGATTRLGLLTNPLRDRFGITFK
LDFYTITELEHVIKRAAMIFNIKISQEAAEKVSRCSRGTPRIAVKLLKRIRDYANYNKTD
FIDIGLVESSLEQLHIDSIGLDNLDYKYIHFIINNYNGGPVGIDTIAAGLSEEKDTIEDT
IEPYLLQIGFINRTPRGRIITNSCAKHIGAIISNKDLELTL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaaggcagcgaaattatacgagataaagtaaatatagatgacatcaatgaa
gtaagtattagacctagcaaattagaagaattcattgggcaagagaaaataattcaaaat
ctaaaggtatttataggtgccgcacagtttagaaatgaatctttagatcatgtattattt
catgggccacctgggcttggaaaaacaactttagctcaaatcatagccaaagaagtaaac
tctaacataaaaattacatcaggacctatgctaagcaaaactagagatttagctgcagtt
ttaacaaatcttgaggaaaacgacatactctttattgatgaaattcatagaatggcctct
tctgttgaagaagttctttatcctgctatggaggatttttatatagatttaataattgga
gatggaccagctgcacgaactgtcaaaatcaatttgccaaaatttactttagtgggggca
acaactaggttaggattattaactaaccctctaagagatagatttggcataacatttaag
ctagatttttataccatcactgaacttgaacatgttattaaaagagctgcaatgattttt
aacataaaaatttctcaagaagctgcagaaaaagtatctagatgttctagaggtactcca
aggattgcagtaaaattattaaaaagaatacgggactatgccaattataataaaaccgat
tttatagatattggtttagtcgaatcatcattagagcaactgcacattgattctatagga
ttggataacttagattataaatatatacatttcataataaataattataacggtggaccg
gtcggaatagataccatagcagcaggattatcagaagaaaaagatacaatcgaagataca
atagagccttatctactccaaattggattcattaatagaactccaagaggtaggataata
acaaattcatgcgcaaaacacataggagctattattagcaacaaagatttggagttaaca
ttataa
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