Candidatus Bandiella numerosa: N3Z17_06625
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Entry
N3Z17_06625 CDS
T09014
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bnu
Candidatus Bandiella numerosa
Pathway
bnu03030
DNA replication
bnu03430
Mismatch repair
bnu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N3Z17_06625 (dnaE)
03430 Mismatch repair
N3Z17_06625 (dnaE)
03440 Homologous recombination
N3Z17_06625 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bnu03032
]
N3Z17_06625 (dnaE)
03400 DNA repair and recombination proteins [BR:
bnu03400
]
N3Z17_06625 (dnaE)
Enzymes [BR:
bnu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N3Z17_06625 (dnaE)
DNA replication proteins [BR:
bnu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N3Z17_06625 (dnaE)
DNA repair and recombination proteins [BR:
bnu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N3Z17_06625 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WHA04889
LinkDB
All DBs
Position
1393407..1396778
Genome browser
AA seq
1123 aa
AA seq
DB search
MSLFINLRTFSDYSIGKSVIKLPDLAQHCLDKAIPAVALTDYNNLFGSLEFSLECQKKGI
QPIIGTVITINFGTSEKEIFADILLLVKNKLGYENLMKLVSDCYLNSPHKPHIVLNNLLD
NSEGLIILCGNNGSPIEKLFYLGRKEETRQFIDTLLENFKENIYLELTRLENKFDYEFDK
FIKEVAIDKDIPIVATNPTYYINQTMQDALDALICITEGRYLVEEERNKACSDGYFKSMR
QMQELFSDIPEAISNTELIARRCTFLLGESKPLLPKFYPTKKQEANELIDQAKEGLKARL
HGKNYDSEKQNLYFERLDYELSVINKMEFGGYFLIVADFIKWSKNQQIPVGPGRGSGAGS
IVAWSLQISDIDPIKFGLLFERFLNPDRVSMPDFDIDFCQERRDEVINYVKKKFGEDKVA
HIITFGKLQARAVLRDVGRVLQIPYGQVDKICKMVPSNPANPITLKEAIDMDRELKLQSK
SDSSIEKLISTSLKLEGVNRHISTHAAGIVIGDKELTKIVALYRDSHTTMPMVQYSLKYA
EKIGLVKFDFLGLKTLTVISWSCNLIKESGKNLDLQAIPLDDKKTYEMLGQGHCIGVFQF
ESSGMRETIKKIEPDNIGDLIALGSLYRPGPMDNIPSYINRKHGREEIDYVHPLLETVLK
ETYGIIVYQEQVMEIAQILANYTLGEADLLRRAMGKKIKEEMEAQRNKFITGCVNNNIHK
TKAEEIFNLVNKFASYGFNKSHAAAYAYISFQTAYLKANYTLEFITSSINLEIDNTDKIY
VFIIEAKKFSIDILLPDVNSSKSKFTIEDNKIRFGLAGLKGVGKKAIDLMVAERENNGNY
KDIFDFVERLSDIGLNKKILENLIKSGAFDSLGINRNSLLLNIDILLKHATSTNYNEDQL
DLFFDTSSNFKFRPKLEEFEELNEKEKLSAEFESFGYYISTHPIQKYKCFFDKLNISEAT
DIDKIEASVSKIKLIGVLISKKIRSTPRGKYAFLQISDLRGIIDLAIFDETLLYNSNEFL
VEGNSLYFSTEVRKDNAGVRIIAESVEGIDQAILRSNVKAKVSINSFEQLEYLKERVNYA
SGIKIKLSIKLETGDVVYFKQKNNIFINLSELPNLQSMGIANL
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtcattatttattaatttaagaacattttctgattattctattggcaaaagtgtaatt
aaattaccagatttagctcaacattgtcttgataaagccataccagctgtcgctcttact
gattataacaacttatttggctcattggaattttctttagaatgccaaaaaaagggtatt
cagcccattattggaacagttataactattaattttggaacttcggaaaaggaaattttt
gcagatattttattgttagtaaaaaataaactaggatatgaaaatttaatgaaattagta
agtgattgttacttgaacagcccacataaaccccatatcgtattgaataatttgcttgat
aactccgaaggtttaataattttatgtggcaacaatggttcgccaatagaaaagttattt
tatttaggtagaaaagaagagacaaggcaatttatagatactctcttagaaaattttaag
gaaaatatctatttagaattaactagattagaaaataaatttgactatgagtttgataaa
ttcattaaagaagttgctatagacaaagatataccgattgttgcaacaaatccaacttat
tatattaatcaaacaatgcaagatgctctagatgcgttgatttgcataactgaaggtaga
tatttagttgaagaagaaagaaataaggcatgctctgatggatattttaagagtatgcgt
caaatgcaagagctattttctgatattcctgaagcaataagtaatactgagctaattgca
aggagatgcacatttttactgggtgaaagtaaaccgctattaccaaaattttatccaaca
aaaaaacaagaagcaaatgaattaattgatcaagcaaaagaaggcttaaaagctagatta
catggtaaaaattatgattcggaaaagcaaaatctatactttgaaagattagactatgag
ctttcagtaataaataaaatggaattcggtgggtattttttaattgttgcagattttatt
aagtggagtaaaaatcaacaaattcctgtaggtcctggcagaggctcaggtgcaggttcc
atagtagcatggagtttgcaaattagtgacattgatcctataaagtttggccttcttttt
gaaagatttttaaatccagatcgtgtatctatgccagattttgacatagatttttgccaa
gaaagaagggatgaggtcataaattacgtaaagaaaaaattcggtgaagataaagttgct
catattataacatttggaaagttgcaagctagagctgtcttaagagatgtaggaagagtt
ttgcaaattccatatggtcaagttgataaaatttgtaaaatggttccaagcaatcctgca
aaccctattacacttaaagaagcaattgatatggatagggaactaaaactacaaagcaaa
agtgattcatctatagaaaagcttatttcaactagcttaaaattagaaggggtcaatagg
catatttcaacccatgcagccggcattgtaataggggataaagaactaactaaaatagtt
gcactttatagggattcacatacaacaatgccaatggtgcaatattcattaaaatatgct
gaaaaaattgggttagtaaaatttgatttcttaggtctcaaaactttaacagtaatttct
tggtcctgtaacttaattaaagaaagcggtaaaaatttagacctacaagcaataccactg
gatgataaaaaaacttatgaaatgttaggtcaaggacattgcataggggtttttcaattc
gagagttctggtatgagggagacaattaaaaaaattgaaccagataacattggtgattta
attgcacttggctctctatacagacctggtccaatggataatataccaagttatataaat
aggaagcacggtagggaagaaattgattatgttcatccactattagagacagtgctgaag
gaaacgtatgggattattgtatatcaagaacaagtaatggagatagcacaaattttagca
aattacactttaggggaagctgatttgttaagacgcgctatggggaaaaagatcaaagaa
gagatggaggcacaaagaaataaatttattacaggttgtgtaaacaataatattcataag
acaaaggccgaagaaatatttaatcttgtgaataaatttgctagctatggcttcaataaa
tctcatgcagctgcatatgcctatatctcatttcagacagcatacctaaaagcaaattac
actttagaatttataacttcctcaattaatttagaaatcgataatacagataaaatttac
gtttttataattgaagcaaaaaaattcagcatagatattctcttgcctgatgttaattcc
tcaaaatcaaaatttactatcgaggataataaaattaggtttgggctcgctggtcttaaa
ggcgtcgggaaaaaggctattgatttaatggttgcggagagagaaaacaatggaaattac
aaagatatttttgattttgttgagaggttatcagatatcggcttaaataagaaaatttta
gaaaacctaattaaatcaggtgcttttgacagtcttggtataaatagaaactctttattg
ttaaatatagatatattactaaaacacgctacatccacaaattataatgaagatcaactt
gatttattttttgatacatctagtaactttaaattcaggcccaagctagaagaatttgaa
gaattgaacgaaaaagaaaagctaagcgctgaattcgaatcttttggatattacatatca
acccaccctatccaaaagtataagtgcttttttgataaattaaatatttctgaagcaact
gatatagataagattgaagcctcagtatcaaaaataaaattgattggggtattaatttca
aaaaaaattaggtcaactccaagagggaaatatgccttcttacaaatctcagatttgagg
gggattatagatttagcgatttttgatgagaccttgctctacaattcaaatgaattttta
gtggagggcaatagtttatatttttcaaccgaagtaagaaaagataatgctggtgtacga
attatcgcagaaagcgttgaaggaattgatcaagctattttgagatcaaatgttaaggcc
aaagttagcataaatagttttgaacaactggagtatctaaaagaaagagtcaattatgct
tctggaataaaaattaaactaagcataaaattggaaacaggagatgttgtatattttaag
caaaaaaataatatatttatcaatttgagtgagttgcctaatttgcaaagtatgggtatt
gcaaatttatag
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