Borrelia nietonii: bhYOR_000853
Help
Entry
bhYOR_000853 CDS
T09752
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
bny
Borrelia nietonii
Pathway
bny03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
bhYOR_000853 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bny03400
]
bhYOR_000853 (uvrA)
DNA repair and recombination proteins [BR:
bny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
bhYOR_000853 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
bhYOR_000853 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_16
RsgA_GTPase
nSTAND1
nSTAND3
AAA_23
AAA_25
AAA_15
AAA_22
AAA_18
NACHT
SLFN-g3_helicase
AAA_33
cobW
Viral_helicase1
DnaJ_CXXCXGXG
T2SSE
DUF3688
Rad50_zn_hook
Motif
Other DBs
NCBI-ProteinID:
UPA09517
LinkDB
All DBs
Position
904815..907655
Genome browser
AA seq
946 aa
AA seq
DB search
MKEKITVRGAKEHNLKNVNVDIPRNSLVVISGKSGSGKSSLAFDTIFAEGQRRYMESVSS
YARQFLGIMKKPNVEYIGGLSPAISIEQRTISSNPRSTVGTITEIYDYYRLLFAKIGKPY
CPKDGSLIEEQSLDNMINTVLSYAEGSKVILFAPIVMGAKGTHKKELERILNQGFNRVRV
DFQDYLIEDAVNLSLDKNKKHNIEIIVDRIKLSSDVRIRLSESIETALSVSNGYLRVEIE
NDLEKIDKIFTEHNSCPLCGFSLPAIEPRLFSFNSPFGACNECSGLGVTLDFDFEKICPN
LKLSFNDDAFITFKPSSSWALAIFKGLAKHYGFSLDTPIADIPEDILRKILYGANEKIDF
IYKSKEMGSKDIDGGFYYSKEFEGLIPLLKRRYLATESESARFFYEGLMSRRICNSCKGK
RLSLGALSVKLGGKDIQELSNLSVIDSYSFFEKIELDELRTKISKEILKEIKSRLKFLID
VGLSYLYLDRMSGTLSGGEAQRIRLATQIGSALAGVLYVLDEPSIGLHQRDNEKLISTLV
NLKELGNTVIVVEHDEQTLRTADYIIDVGPGAGIYGGEIVAKGTLSDILSNENSLTGKYL
SGQLKIEVPKTRRKAGKAEIVLLNANKNNLKNINVRIPLGVFTVITGVSGSGKSTLLNEV
LYPALDSRLKSNTSYFDGFEDIIGYDQIDKVIQINQKPIGKTPRSNPATYVGFFTEIREL
FAKLPESKARGFKAGRFSFNVKGGRCEKCQGDGYLNIQMHFLPDVFVPCDLCKGKKFNEE
TLEIRYKGKNIYDVLEMSVIEAKDFFENIPKVNHYLNILKEVGLEYIKLGQASTTLSGGE
AQRIKLAFELGKRSTGKTFYIIDEPTTGLHFDDIRKLLEVLQLLVQNGNTVVLIEHNLDV
IKQADYIIDLGPEGGVSGGNIVVSGTPEEVSKCKSSYTGMFLKTLL
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggaaaaaattactgttaggggtgccaaagagcataatttaaaaaatgttaatgtt
gatattccaagaaatagtttggtagtgatatctgggaagagtggttctggtaagtcgtct
ttggcttttgatacaatttttgcagaaggtcagagaaggtatatggaatctgtgtcgtct
tatgcaagacaatttttgggaataatgaagaaacccaacgttgaatatataggaggactc
tctcctgctatttcaattgaacagaggacaataagcagtaatccaaggtcaactgttggt
acaattactgaaatttatgattattatagattgttatttgcaaaaattggtaagccatat
tgtccaaaagatggaagtttgattgaggagcaatctttagataatatgattaatactgtt
ttaagctatgctgagggatctaaggttatattatttgctcctattgttatgggtgccaag
ggtactcataaaaaagagcttgagaggatattgaatcaagggtttaatagagtaagagtg
gactttcaagattatttgatagaagatgctgttaatttgagtttagataaaaataagaaa
cataatattgaaattatagtagaccgaataaaattgagtagtgatgtaaggattaggctt
tcagaatctattgagactgctttatcggtttctaatgggtatttacgtgttgagattgaa
aatgatttagaaaaaatagataaaatctttacagagcataatagttgtcctttgtgtggg
ttttctcttcctgcaatagaaccgaggcttttttcatttaatagtccatttggagcttgt
aatgaatgttctggtcttggtgttacacttgactttgattttgaaaaaatttgtcctaat
ttgaagctttcttttaatgatgatgcatttattacttttaaacccagttcatcttgggct
ttagctatttttaagggacttgctaagcattatggtttcagtttagatactcctatagca
gatattcctgaagatattcttagaaagattttatatggcgctaatgaaaagatagatttt
atctataagtctaaggaaatggggagtaaagacatagatggtggtttttattattctaaa
gaatttgagggtcttattcctcttttaaagaggcgttatcttgcaactgaatctgagagt
gctagattcttttatgagggtttaatgtctcgcagaatttgtaattcttgcaaaggtaag
cggttaagccttggagctttatctgttaaattgggcggcaaagatattcaagaacttagt
aatctttctgttatagattcttattcgttttttgagaagattgaacttgatgagcttagg
acaaaaatttctaaagaaattttaaaagaaattaagagcaggctgaaatttttaattgat
gttggactttcttatttatatttagatagaatgtctggaaccctttcaggaggagaggct
caacgaattagacttgctactcaaataggttcagctcttgctggggttctttatgtactt
gatgagcctagtattggattgcaccaaagagataatgagaaattaataagtacacttgtt
aatttgaaagaacttggcaatacggtaattgttgtagagcatgatgagcaaactttacgt
actgctgactatattatcgatgttgggcctggagctgggatttatggtggagagatagtt
gctaagggaaccttatctgatattttaagtaatgagaatagtttgactggtaagtattta
agcggccaacttaaaatagaagttccaaaaacaagacgtaaggcaggaaaagctgaaatt
gtacttttgaatgctaataaaaataatttaaagaatattaatgtgcgcattcctttggga
gtttttactgtaataacgggagtttctggtagtggaaagagcacccttcttaatgaggta
ttatatcctgctcttgatagtaggttaaaatccaatacaagttattttgatggttttgag
gatatcattgggtatgatcaaattgataaggttattcagataaaccaaaaaccgataggc
aagaccccaagatcaaatcctgcaacttatgttggattttttacagagattagagaacta
tttgcaaagctcccagagtctaaagcaaggggatttaaggcaggtagattttcttttaat
gttaagggcggacgttgtgaaaaatgtcagggtgatgggtatttaaatattcagatgcat
tttttacctgatgtttttgttccttgtgatttgtgtaagggtaaaaaatttaatgaagaa
accttggagattagatataaggggaaaaatatttatgatgttttagaaatgagtgttatt
gaagctaaagatttttttgaaaatattccaaaggttaatcattatttaaacattttaaaa
gaagtgggacttgaatatattaaattaggtcaagcatcgacaaccctttcaggaggagag
gctcagcggatcaaattggcttttgagcttggcaagaggagtacaggaaagactttttat
attattgatgaaccaacaacaggtttgcatttcgatgatataagaaaattgttagaggta
ttgcaattgcttgttcaaaatggaaatactgtagttcttatagaacataatttagatgtg
attaaacaggcggattatataatagacttaggtcctgagggtggggtatctggaggaaat
attgttgtatctggaactcctgaagaggtttcaaaatgcaaaagttcctatacgggaatg
tttttaaaaactcttttgtaa
DBGET
integrated database retrieval system
