Bacteroides ovatus: Bovatus_00125
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Entry
Bovatus_00125 CDS
T04113
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
boa
Bacteroides ovatus
Brite
KEGG Orthology (KO) [BR:
boa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boa03400
]
Bovatus_00125 (sbcD)
DNA repair and recombination proteins [BR:
boa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bovatus_00125 (sbcD)
Archaeal homologous recombinant proteins
Bovatus_00125 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ALJ44797
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All DBs
Position
165232..166527
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AA seq
431 aa
AA seq
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MLFLPLVIRDSYKIMIRILHTADWHLGQTFFGYDRTEEHGVFLNWLAEEIRQKEIDALII
AGDVFDVSNPSAASQSMYYQFIYRVTAENPYLQIVIVAGNHDSAARLEAPLPLLQAMRTE
VRGVVRKLEGGEIDYDHLTVELKNRKGEVELLCMAVPFLRQGDYPAVQTEGNPYAEGVRE
LYAQLLQRLWKRRTENQAILAIGHLQATGSEIAEKDYSERTVIGGLECVSPETFSEQIAY
TALGHIHKAQRVSGRENVRYAGSPIPMSFAEKHYHHGVVMVTFDGGCAVDIERLECPKLI
PLLSVPNGEPVSPEAVLEALKELPETEAVAPYLEVKVLLEEPEPMLRQEIEDALADKNYR
LARIVSTYRTETGNTTKENENWKRGLQEMSPLQIAQSAFEKIYQVEMPVELTGLFEEAYL
AATRKEEEEEE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgttatttttgcctcttgttattagagatagttacaaaattatgatacgtatattacat
actgccgactggcatctgggacaaaccttttttggttatgatcgcacggaagaacatgga
gtattcctgaattggctggcagaagaaattcgtcagaaagagattgatgcattgattata
gccggagatgtttttgatgtttccaacccttccgcagcatcccaaagcatgtattatcag
tttatttatcgggtgacagcagagaatccgtatttgcagattgtcattgttgccggcaat
catgattcggcagcacgcctggaggctcctttgcctctgttgcaagctatgcggacggaa
gtcagaggggtagttcgcaagctcgaaggcggagaaatcgattatgaccatttgactgtg
gaactgaagaaccggaaaggggaagtggaattgctttgcatggcagttccttttctgcgt
cagggagattatccggccgtgcaaacggaaggcaatccgtatgcggagggagttcgcgaa
ctttatgcacaacttttgcaaaggctatggaagcgaaggacggagaatcaggcgattctt
gccatcggtcatttgcaggctacaggatcggaaattgcagagaaggattatagcgagcgt
accgtgattggtgggctggagtgcgtatctccggaaactttttccgaacagatagcttat
acggcattgggacatatacataaagcgcagcgagtgtccggaagagagaatgtgcggtat
gccggaagtcccattccgatgtcttttgccgagaaacattatcatcatggagtcgtgatg
gtgactttcgacggaggttgtgcggtggacattgaacggttggaatgcccgaaattaata
cctttgttgagtgtcccgaacggagaacctgtttcaccggaagccgtcttggaagccttg
aaggaactacccgagacagaagccgtagccccatatctggaagtaaaggtattgttggag
gaaccggaacccatgcttcggcaggagattgaagatgcactggcagataaaaactatcgg
ttggcgcgtattgtttctacctatcgcactgaaactggaaatacgacgaaagaaaatgaa
aactggaagagggggttgcaggaaatgtctcccttgcagattgcacagtctgcctttgag
aagatttatcaggtggaaatgcctgtagaactgacaggtttgtttgaagaggcctatttg
gctgctacccgtaaagaagaggaggaagaagaatga
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