Bacteroides ovatus: Bovatus_00126
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Entry
Bovatus_00126 CDS
T04113
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
boa
Bacteroides ovatus
Brite
KEGG Orthology (KO) [BR:
boa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boa03400
]
Bovatus_00126 (sbcC)
DNA repair and recombination proteins [BR:
boa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bovatus_00126 (sbcC)
Archaeal homologous recombinant proteins
Bovatus_00126 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
nSTAND3
T2SSE
ABC_tran
MMR_HSR1
AAA_22
AAA_16
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ALJ44798
LinkDB
All DBs
Position
166524..169391
Genome browser
AA seq
955 aa
AA seq
DB search
MKILAIRLKNLTSIEGTVEVDFMAEPLHSAGIFAISGPTGAGKSTLLDALCLALYDKAPR
FATSVENVNLADVGDNQINQSDVRNLLRRGTSDGYAEVDFLGIDGRRYRSRWSVRRTRNK
INGSLQPQTLEVKELDTEKEFQGTKKELLIQLVELVGLTYEQFTRTVLLAQNDFATFLKS
KGAAKAELLEKLTGTGVYSRISQEVYARNKAAQEEVTLIQNRMNVIELMPEEELLALQKE
KELSTEKRAAGIKLLAEQNEQLNVVRSLKIQEELCKKKQQEEQEEQAREKVLQGALTSQE
EGLVHFKAQWEAIQPDLKKARQLDVQIQSQQSSYIQSQQILQAANRQVAEQEQKMRVAAE
QLQVSYSSLNRLLSHVGIEEALQLEQVEEILRQEENKLAAATSTNEERLLRLNSFGYPLL
AEEQVKLQKELTRQQNIRQLTETQTKAKTEIERLEKEVANCLKQLTEQETALKVTQRLYE
NARMAVGKDVKALRRQLQEGEACPVCGSTAHPYHQEQEVVDTLFRSIEQEYNVASTNYQQ
MNNRSIALQRDLAHQKTVDGQIAEQLAALYKAGIEAGNEEQIQHRLAELAIRILEYRNLY
AEWQRSDEEIKKMRAHCEALRENVSLCRLAMQKVSSAKEQLVILQNAASAELKRFEVIEK
ALNVLRQERSQLLKGKSADEAEAAVAKREKELNLALEKARKEVEAVHNRLSGLQGEMKQI
ALAIGELQEQYKKIESPELLPEIIKKQQEENLNIERALSTMEARLLQQAKNKLTVEQIAK
ELAEKQTVAERWAKLNKLIGSADGAKFKVIAQSYTLNLLLLHANKHLSYLSKRYKLQQVP
DTLALQVIDCDMCDEIRTVYSLSGGESFLISLALALGLSSLSSNNLKVESLFIDEGFGSL
DAESLRTAMEALEQLQMQGRKIGVISHVQEMSERISVQVQVHKKVNGKSVLTVVG
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactagctatacgattgaagaatctgacctcgatagaaggaacggtagaagtg
gattttatggcagaaccattacattctgcaggtatctttgccatttcaggacctaccggt
gcaggtaagtctactttattagatgccttatgcctggcattgtatgataaggctccccgc
tttgctacttcagtggaaaatgtgaacctggcagatgtgggagacaatcagattaatcag
tctgatgttagaaatttgctgcgccgggggacaagtgatggttatgcggaagtcgatttt
ttaggtattgacggacggcgttaccgttctcgttggtcggtgaggcggacaagaaacaag
ataaacggttctttgcagccacaaacgctggaagtgaaagaactggatacggagaaagaa
tttcaaggtaccaagaaagagttgttgattcagttggtggagttggttggcctgacgtat
gaacagttcacccgtacagtattattggcacaaaatgattttgctacatttctgaaatca
aaaggggcggcaaaagcagaattactggagaagttgacaggaaccggtgtgtattcccgg
atttctcaagaggtctatgcccggaataaggcggcacaagaagaggtgaccttgattcag
aatcggatgaatgtgatcgaattgatgccggaagaagagctgcttgctctgcaaaaagag
aaagaactatcgactgaaaagcgtgcggcagggattaaactgctggcagaacagaatgaa
caactgaatgtggttcgttcattaaaaatacaggaagaactttgtaagaaaaagcagcag
gaagaacaggaggaacaggctagggagaaagttctgcagggtgcattgacttcccaagag
gaaggattggtgcattttaaggcacaatgggaggccatacagccggacttgaagaaagca
cgtcaattggatgtacagatacagtctcaacaaagcagctatatacagtcgcagcagatt
ttacaagcggctaacaggcaggtggcggagcaggaacaaaaaatgcgagtggctgcggaa
caattacaggtgtcttattcttctctgaaccgcttattaagccatgtagggatagaagaa
gcactgcaacttgaacaggtggaagagattctacggcaagaagaaaacaaactggctgcc
gctacaagtacgaatgaggaacgtttgttgcgcttaaattctttcggatatccgttattg
gccgaagaacaggtgaagttgcaaaaagagttgactcgtcagcagaatatccggcaatta
acggaaacgcagacgaaagcaaagacggaaatagaaagactggagaaagaagtggccaat
tgtctgaaacaattgacggagcaagaaactgcattgaaagttactcaacgtctttacgaa
aatgcacgtatggcagtgggaaaagatgtgaaagcattgcgccggcaattacaggaaggg
gaggcttgtccggtttgcggtagcacagcgcatccttatcatcaggaacaggaggtggta
gatactcttttccggagtatagagcaggagtataatgtagcatcaaccaactatcagcag
atgaataaccggagcattgctctgcaacgtgatttggcgcatcaaaaaacggtggacgga
cagatcgcggaacagttggcagcattatataaagcagggattgaagccggaaacgaagag
caaatacaacaccgtttggcggaactggcaatacgtattttggaatatcgcaatctttat
gcagaatggcagcgcagcgatgaagaaattaaaaagatgcgtgcacattgtgaagccctc
cgtgagaatgtttctctctgtcgtttggctatgcagaaagtatcgtctgccaaagaacag
ctggtaatcttacagaatgctgcttcggccgaactaaagagatttgaagtgatagagaaa
gcgctgaatgtgcttcgtcaggaacgttcgcagctattgaaaggaaaaagtgcggatgaa
gcggaagctgccgtagcaaaaagagagaaagaactgaatctcgctttggagaaagcacgt
aaagaagtagaggcggtacacaaccggctttccggtttgcaaggagagatgaagcaaatt
gcactggctataggagagttgcaggaacagtataaaaagatagagtctcccgaactgctt
cccgaaataataaagaagcaacaggaagaaaacctgaatatagaacgtgccctttctact
atggaagcccgcctgctacaacaagcaaagaataaactgactgtggaacagattgcgaag
gaactggcagagaaacaaactgttgccgaacgttgggcaaaattgaataaactgattggc
agtgcggatggagcgaaatttaaagtgattgctcaaagttatactttgaatttgttgttg
cttcatgccaataaacatttatcctatctctctaaacgctataagctgcaacaggtaccc
gatacgttggcacttcaggtaatagattgcgatatgtgtgatgaaatacggaccgtgtac
tctctttcaggaggtgaatcgttcctgatttctttggcactggctttaggtttgtcttcc
ttgtcaagtaataatctgaaagttgaatctctttttattgatgaaggtttcggctctttg
gatgcggaaagtttgcgtacagcgatggaagcattggaacaattacagatgcaggggcgg
aaaataggagtaatctctcatgtgcaggagatgagtgaacggatttctgttcaggtgcag
gtacataagaaagtgaatggaaaaagtgtgcttaccgtggtggggtaa
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