Bacteroides ovatus: Bovatus_00183
Help
Entry
Bovatus_00183 CDS
T04113
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
boa
Bacteroides ovatus
Pathway
boa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
boa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bovatus_00183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boa03021
]
Bovatus_00183
Transcription machinery [BR:
boa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bovatus_00183
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Sigma70_r2
GerE
HTH_23
HTH_11
HTH_40
UPF0122
HTH_38
PhyR_sigma-like
Phage_antitermQ
HTH_29
HTH_28
HTH_24
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ALJ44855
UniProt:
A0ABU3IKT4
LinkDB
All DBs
Position
245620..246168
Genome browser
AA seq
182 aa
AA seq
DB search
MKDEHVNDINNYQKLYMQYAPMLLRFAGKFISPFFAEDIVHDVFLKIWDKQVFLLSESEV
KNILFVAVRNACIDHLRRISLEQEFADKRAIQLKLDELSFYDGADELFMRKDLMAHVMAK
INELPEKRREIFLLSYMEGLKAAEIAERLNLSTRTVENQLYRTLLFLRKELQTAFVYLFM
FV
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgaacatgtgaatgatataaataattatcagaaactgtatatgcaatatgca
cctatgttgttgcgttttgccggaaagtttatttctcctttctttgcggaagatattgtc
catgatgtatttcttaaaatatgggacaaacaagtgtttctgttatcagaatcagaggtt
aaaaatatattgtttgttgctgtccgaaatgcttgtatagatcatttgcgtcgtattagt
ttggaacaggaatttgccgataagcgtgctatccagctcaaattagatgagttgagtttt
tatgacggtgctgatgaattgtttatgaggaaagacttaatggcacatgtgatggcaaaa
ataaatgaactgcccgaaaagagacgtgaaatcttcctgttatcttatatggaagggctt
aaagcggcggaaattgccgagagattaaacttatccacccggacagtggaaaaccaatta
tacagaaccttacttttcttacggaaagagcttcagactgctttcgtttatttattcatg
ttcgtttag
DBGET
integrated database retrieval system