KEGG   Bacteroides ovatus: Bovatus_00183
Entry
Bovatus_00183     CDS       T04113                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
boa  Bacteroides ovatus
Pathway
boa02020  Two-component system
Brite
KEGG Orthology (KO) [BR:boa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Bovatus_00183
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boa03021]
    Bovatus_00183
Transcription machinery [BR:boa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Bovatus_00183
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_ECF Sigma70_r2 GerE HTH_23 HTH_11 HTH_40 UPF0122 HTH_38 PhyR_sigma-like Phage_antitermQ HTH_29 HTH_28 HTH_24 HTH_Tnp_ISL3
Other DBs
NCBI-ProteinID: ALJ44855
UniProt: A0ABU3IKT4
LinkDB
Position
245620..246168
AA seq 182 aa
MKDEHVNDINNYQKLYMQYAPMLLRFAGKFISPFFAEDIVHDVFLKIWDKQVFLLSESEV
KNILFVAVRNACIDHLRRISLEQEFADKRAIQLKLDELSFYDGADELFMRKDLMAHVMAK
INELPEKRREIFLLSYMEGLKAAEIAERLNLSTRTVENQLYRTLLFLRKELQTAFVYLFM
FV
NT seq 549 nt   +upstreamnt  +downstreamnt
atgaaagatgaacatgtgaatgatataaataattatcagaaactgtatatgcaatatgca
cctatgttgttgcgttttgccggaaagtttatttctcctttctttgcggaagatattgtc
catgatgtatttcttaaaatatgggacaaacaagtgtttctgttatcagaatcagaggtt
aaaaatatattgtttgttgctgtccgaaatgcttgtatagatcatttgcgtcgtattagt
ttggaacaggaatttgccgataagcgtgctatccagctcaaattagatgagttgagtttt
tatgacggtgctgatgaattgtttatgaggaaagacttaatggcacatgtgatggcaaaa
ataaatgaactgcccgaaaagagacgtgaaatcttcctgttatcttatatggaagggctt
aaagcggcggaaattgccgagagattaaacttatccacccggacagtggaaaaccaatta
tacagaaccttacttttcttacggaaagagcttcagactgctttcgtttatttattcatg
ttcgtttag

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