Bacteroides ovatus: Bovatus_00381
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Entry
Bovatus_00381 CDS
T04113
Name
(GenBank) type I restriction enzyme EcoKI subunit R
KO
K19789
DNA repair protein RadD
Organism
boa
Bacteroides ovatus
Brite
KEGG Orthology (KO) [BR:
boa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boa03400
]
Bovatus_00381
DNA repair and recombination proteins [BR:
boa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Bovatus_00381
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SLFN-g3_helicase
ERCC3_RAD25_C
DUF3638
Motif
Other DBs
NCBI-ProteinID:
ALJ45049
LinkDB
All DBs
Position
480511..481668
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AA seq
385 aa
AA seq
DB search
MTYQLRDYQKSASDAAVSVFKSKEKKNYVIVLPTGAGKSLVIANIAARIDGPLIVFQPSK
EILEQNFAKLQSYGIFDCGVYSASAGRKDINRITFAMIGSVMKHMSFFKHFKHVLIDECH
LVNPEKGMYKEFFEDEQRKVIGLTATPYRLCSGRGGAMLKFITRTQPKVFTDVIYHCQVS
ELLAKGFLASLKYYDITKLDLSRVRTNSTGADYDEKSLLQEFERVDIYKDIVGWTKRLLN
PKSGIPRKGILIFTRFIREAEKLASEIPNCAIVSGSTPKEERARILKGFKDGRIKVVANV
GVLTTGFDYPELDTIVLARPTKSLSLYYQMVGRVIRPCQGKEGWVVDLSGNFRRFGRVEE
LRIEQPEKGKWCIMSRGRQLTNVVF
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgacataccagttaagagactaccaaaaaagtgctagtgatgcagcggtcagcgttttt
aaatccaaggaaaagaaaaactacgtgatagttcttcccactggtgccgggaagtccctt
gtcattgccaatatagctgcacggatagacgggccgctgatagtgttccagcctagcaag
gaaatactcgaacaaaattttgcgaaacttcaatcatacggcatattcgattgtggagtt
tattcagcttctgccggaagaaaggatatcaatcgtattacgtttgctatgattggtagt
gtgatgaaacacatgagtttcttcaaacatttcaagcacgttctgattgatgaatgtcat
ttagtgaatccggagaaaggaatgtataaggaattctttgaagatgagcaaaggaaagtt
attgggctgacagcgactccttacagattatgttcaggaagaggtggtgctatgcttaaa
tttataactcgtacccagccaaaggttttcactgatgttatttatcactgtcaggtgagt
gaactacttgctaaaggatttctcgcaagtttgaaatactatgatattacaaagttggat
ttaagtagagtcaggactaattctactggtgcagattacgatgaaaaaagtcttctgcaa
gagtttgaacgtgtggacatatacaaagatatagttggatggacaaaacgtctgttgaac
cccaaatcgggcataccacgcaaaggtattttaatattcacgaggtttattcgtgaagct
gaaaaactggcttccgaaattcctaattgtgcgatcgttagcggttctactccaaaggaa
gaaagggcacgaattctgaaaggttttaaagatggaagaataaaagttgttgctaatgtc
ggagtacttacaaccggattcgattacccggagcttgatacgattgttcttgcacgtcca
accaaatccctttccctctattatcaaatggtcggtcgtgttattcgtccctgccaaggt
aaagagggttgggttgttgatttgagtgggaatttccggcgttttgggcgtgttgaagag
ttacgcatagaacagcctgaaaagggaaaatggtgtataatgagtcgtggccgtcaatta
accaatgtagtattttaa
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