KEGG   Bacteroides ovatus: Bovatus_01087
Entry
Bovatus_01087     CDS       T04113                                 
Name
(GenBank) helix-turn-helix protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
boa  Bacteroides ovatus
Brite
KEGG Orthology (KO) [BR:boa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:boa03000]
    Bovatus_01087
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:boa02048]
    Bovatus_01087
Transcription factors [BR:boa03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    Bovatus_01087
Prokaryotic defense system [BR:boa02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    Bovatus_01087
SSDB
Motif
Pfam: HTH_3 HTH_31 HTH_26 HTH_19 HTH_24 HTH_23 YdaS_toxin DNA_pol3_delta_C Sigma70_r4 Sigma70_r4_2 HTH_Crp_2 MarR_2 DUF7726 HTH_Tnp_ISL3 HTH_Mga HTH_10 HTH_28 MarR HTH_7
Other DBs
NCBI-ProteinID: ALJ45738
UniProt: A0A139KYF6
LinkDB
Position
complement(1309636..1309998)
AA seq 120 aa
MTKITKEQYEFALARVEELLPLVDDSTPANDKSMVELSVMSDIVIAYEKEHFPIEKPTVA
ELIELSLEEKGMTQKQLASEIGVSPSRVNDYISGRSEPTLKIARLLCRVLNIHPAAMLGF
NT seq 363 nt   +upstreamnt  +downstreamnt
atgactaaaataacgaaagaacaatacgaatttgcattggcaagagtcgaagaacttctg
cctttggtggacgacagcactcctgcaaatgacaagagcatggtggagctttctgttatg
tctgatatagtgattgcgtatgagaaggaacattttcctatagaaaaaccaaccgtagca
gaattgatagaattgtcccttgaagaaaaggggatgacacaaaaacagcttgccagtgaa
ataggggttagcccttcacgcgtgaatgattatatttcgggtcgctcggaacctacttta
aaaatagctcgcttgctttgccgggtactcaatatacaccccgctgccatgttgggattt
tga

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