Bacteroides ovatus: Bovatus_01908
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Entry
Bovatus_01908 CDS
T04113
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
boa
Bacteroides ovatus
Pathway
boa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bovatus_01908 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boa03019
]
Bovatus_01908 (recQ_1)
03400 DNA repair and recombination proteins [BR:
boa03400
]
Bovatus_01908 (recQ_1)
Enzymes [BR:
boa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bovatus_01908 (recQ_1)
Messenger RNA biogenesis [BR:
boa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bovatus_01908 (recQ_1)
DNA repair and recombination proteins [BR:
boa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bovatus_01908 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Cas3-like_C_2
Helicase_Sgs1
TetR_C_25
Motif
Other DBs
NCBI-ProteinID:
ALJ46548
UniProt:
A0A5M4ZZR2
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All DBs
Position
2335023..2336831
Genome browser
AA seq
602 aa
AA seq
DB search
MRETLKTYFGYDSFRPLQEEIIRHILNKQDALVLMPTGGGKSICYQLPALLCEGTAVVVS
PLISLMKDQVEALLANGIAAGALNSSNDETENVQLRRACVEGRLKLLYISPEKLLAEKDY
LLRDMNISLFAIDEAHCISQWGHDFRPEYTQMGVLHQQFPQIPIVALTATADKITREDIV
RQLHLNHPRIFISSFDRPNISLTVKRGFQAKEKNKAILEFIHRHGGESGIIYCMSRNKTE
TVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRWVIH
YNLPKSIESFYQEIGRAGRDGLPSSTVLFYSLGDLILLTKFASESNQQSINLEKLQRMQQ
YAEADICRRRILLSYFGETTTEDCGNCDVCKNPPQRFDGTVIVQKALSAIARTEQQISTG
LLIDILRGNYSAEVTGKGYQELKTFGAGRDIPPRDWQDYLLQMLQLGYFEIAYNENNHLK
ITASGSDILFGRAKATLAVIRHEEVATQKGKKKKVVVAKVLPFGLEGGENEDLFEALRGL
RKQLADQEALPAYIVLSDKVLHLLSISRPTTIEEFGEISGIGEYKKKKYGKDFVNLIRQF
VE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaactctaaagacatatttcggatacgatagtttccgtcctctgcaagaagaa
atcatccgccacatcctaaacaaacaggatgcattggtattaatgcctactggtggggga
aaatcaatctgctaccaactccctgcattgctttgcgaaggtactgccgttgtcgtttcc
ccacttatctcattgatgaaagatcaggtagaagcattgctggcaaatggcatcgcagcc
ggggcactgaacagcagtaatgacgaaacggaaaacgtccaactgcgtcgcgcatgtgtt
gaaggacgactgaagctgctttacatttcaccggaaaaacttttagcagaaaaggattat
ttgttgcgggatatgaacatctctctgtttgctattgatgaagcgcattgtatttcacaa
tggggacatgacttccgtccggaatacacacaaatgggagtgcttcaccaacaatttccg
caaataccgattgtcgcactaactgctactgcggataaaatcacgcgcgaagacattgta
cggcaattacatctcaaccatccccgtatctttatctcatctttcgaccgccccaacatt
agcctgactgtgaaacgtggttttcaagcgaaagagaagaacaaggctatcttagaattt
attcaccgccacgggggagaaagcgggattatttattgtatgagccgaaataagacagaa
accgtcgcacagatgttgcaaaagcagggtattcgctgcggtgtctatcatgccggatta
tccacccaacaccgggacgaaacacagaatgattttattaacgaccgcatacaggtagta
tgtgccaccattgcttttggaatggggattgataaatcaaatgtccgctgggtcatacat
tataacctgcctaaaagtatagaaagtttttatcaggaaataggacgtgccggacgggat
ggactgcccagcagtactgtcctattttattcactcggagatcttatattactcactaaa
tttgcttcggaaagcaatcagcagagcatcaatctggaaaagctacaacggatgcagcaa
tatgctgaagccgatatttgccggagaagaatcctgttaagctatttcggagaaacaaca
acggaggattgcggtaattgcgatgtttgtaaaaatcctcctcaacgatttgacggtacg
gtcattgtgcaaaaggcattaagcgccatcgcacgtacagaacaacaaatcagcacagga
ttgctgattgacattctccgtggaaactattctgcggaagtaaccggaaaagggtatcag
gaacttaaaacgttcggtgccggacgcgacattcctcctcgtgactggcaagactatctg
cttcagatgttgcaactcggctactttgaaatagcctataacgaaaacaaccatcttaaa
attactgcaagcggaagtgatattctcttcgggagagctaaggcaacattagcagtcatc
cggcacgaagaagtcgccactcaaaaaggaaaaaagaaaaaagtggttgttgcaaaggta
cttcctttcggcctggaaggtggagaaaacgaggatttattcgaagccttacgcggattg
aggaaacaactggccgatcaggaggcactacccgcctacatcgtcttgtcagacaaagta
ttacacctgcttagtatttcccgtcctaccactatagaagaattcggagaaatcagcggt
atcggagaatacaagaagaaaaaatacggaaaagacttcgttaatttgattaggcagttt
gtagaataa
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integrated database retrieval system
