Bacteroides ovatus: Bovatus_02910
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Entry
Bovatus_02910 CDS
T04113
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
boa
Bacteroides ovatus
Brite
KEGG Orthology (KO) [BR:
boa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boa03032
]
Bovatus_02910 (topA)
03400 DNA repair and recombination proteins [BR:
boa03400
]
Bovatus_02910 (topA)
Enzymes [BR:
boa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Bovatus_02910 (topA)
DNA replication proteins [BR:
boa03032
]
Prokaryotic type
DNA Topoisomerases
Bovatus_02910 (topA)
DNA repair and recombination proteins [BR:
boa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Bovatus_02910 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
ALJ47520
UniProt:
A0A395W128
LinkDB
All DBs
Position
3570212..3572557
Genome browser
AA seq
781 aa
AA seq
DB search
MQKNLVIVESPAKAKTIEKFLGKDFKVLSSYGHIRDLKKKDFSIDVNNDFKPSYEIPADK
KALVSTLKTEAKEAETVWLASDEDREGEAIAWHLYEVLKLKPENTKRIVFHEITKSAILK
AIEQPRDIDLNLVNAQQARRILDRIVGFELSPVLWRKVKPALSAGRVQSVAVRLIVERER
EIHAFQTEAAYRITAVFLVPDTDGKLVEMKAELARRIKTKEEAKAFLNACQGASFAIDDI
TTRPVKKTPPAPFTTSTLQQEAARKLGYTVAQTMMLAQRLYESGFITYMRTDSVNLSEFA
TAGSKDAIIKMMGDRYVHPRHFETKTKGAQEAHEAIRPTYMENQSIEGTAQEKKLYDLIW
KRTIASQMADAELEKTTATITISGSSDVFTAIGEVIKFDGFLRVYRESYDDDNEQEDESH
LLPPLKKGQKLEHGPIIATERFTQRPPRYTEASLVRKLEELGIGRPSTYAPTISTIQQRE
YVEKGNKDGEERQFNVMTLKDCQIKDENHTEITGAEKAKLFPTDTGTVVNDFLTEYFPDI
LDFNFTASVEKEFDEIAEGEVKWTSIMKNFYDKFHPSVENTLAIKTEHKVGERILGEEPG
TGKTVSVKIGRFGPVVQIGTVEDEEKPRFAQMKKGQSMETITLEEALELFKLPRTLGEYE
GKSVSVGVGRFGPYVLHNKVYVSLPKTLDPMEITLEEAEQLILEKRQKETERHIKKFEEE
PELEILNGRYGPYITYKGSNYKIPKDIVPQDLSLASCLELIKLQDEKGPATTKKGRFAKK
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaaccttgtcattgtcgagtctccggcaaaagcaaaaacgattgaaaagttt
ctggggaaagatttcaaagtcctttctagttacggacacatacgcgatctgaagaaaaaa
gatttcagtatcgacgtaaataatgattttaaacccagctacgaaatcccggcagacaaa
aaggcgctggttagcacactaaagacagaagctaaagaggcagaaaccgtatggctcgca
tccgatgaggaccgcgagggagaggcaattgcctggcatctgtatgaggtcttaaaacta
aaaccggaaaacacaaaacgaatcgtatttcatgaaattacgaaaagcgctattttaaaa
gcgattgagcaaccacgcgacattgacctcaacctcgtaaatgcacagcaagcacgacgg
attctggaccgtatcgtaggtttcgaactctctcccgtgctttggagaaaagtgaaaccg
gcactttctgccggacgtgttcagtctgtcgctgtccgcctgatcgttgaacgtgaacgt
gaaatacatgctttccaaacggaagccgcttatcgcatcactgccgtattcctcgttccg
gacacggacggaaaactggtggaaatgaaagctgaactggctcgccgtattaaaacaaaa
gaagaagcgaaagctttcctcaacgcatgtcagggagcaagctttgccatcgacgatatt
actacccgcccggtcaagaaaacgcctcctgctccattcacaacatctacgttgcaacag
gaagccgcacgcaaactgggatataccgtagcgcagaccatgatgctcgcgcaacgctta
tacgaatcgggattcatcacttatatgcgtacagactctgtcaacctctcggaatttgcg
acagcaggcagtaaagacgctatcatcaaaatgatgggtgaccgctacgtacacccccgc
catttcgaaacaaagactaagggtgcacaagaagcgcatgaggctatccgccctacctat
atggaaaaccaatccattgaaggaacagcacaggaaaagaaactgtacgacttgatatgg
aaacgcaccattgcctcacaaatggcagatgcagaactggaaaagacaactgctaccata
acaataagtggcagcagcgacgtgtttacagccatcggcgaagtgattaagtttgacggg
ttcctgcgtgtataccgtgaatcttatgatgatgacaacgaacaggaagatgaaagccac
ctgcttcctcccctgaaaaaaggtcagaagttggaacacggccctatcatcgcaaccgaa
cgtttcacccaacgtcctccacgctatactgaagcaagtcttgtacgcaagttggaagaa
ctgggtatcggacgtccgtctacgtatgcacctactatctctaccatccaacaacgcgaa
tatgtggagaaaggtaataaagacggggaagaacggcagtttaatgtcatgacattgaaa
gattgtcagattaaggatgaaaaccatactgaaattaccggtgcagaaaaggcgaagtta
ttcccaacggataccggcactgtggtaaatgatttccttaccgaatatttcccagacatt
ctggatttcaactttaccgccagtgtagaaaaggaatttgacgagattgcagaaggagaa
gtgaaatggacttctatcatgaagaatttctatgataagttccatccgtctgtagaaaac
acattggctatcaagacggaacataaagtaggcgaacgtattctgggagaagaaccggga
acaggcaagactgtttctgttaagattggtcgcttcggtcctgttgtacagattggtact
gtagaagatgaagaaaaaccacgcttcgcacaaatgaagaaaggtcaatccatggaaacc
atcactttggaagaagcactggaattattcaaattacctcgtacactgggcgaatatgaa
ggaaaatcagtcagtgtaggcgtaggccgtttcggtccgtatgtcctgcacaataaggta
tatgtatcgctcccgaaaacacttgatccgatggaaattactttggaagaggcagaacag
ctgattctggagaaacgccagaaagaaacggaacgccacatcaagaagtttgaagaggag
ccggaacttgagattctgaacggacgttacggaccttatattacctataagggttccaat
tataaaattcctaaagatatcgtcccgcaggatttgagtttggctagctgtttggaactc
atcaaattacaagatgaaaaaggaccagcgaccacaaaaaaaggacgattcgcaaaaaag
aaataa
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