Bacteroides ovatus: Bovatus_03112
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Entry
Bovatus_03112 CDS
T04113
Symbol
yesX_1
Name
(GenBank) Rhamnogalacturonan exolyase YesX
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
boa
Bacteroides ovatus
Brite
KEGG Orthology (KO) [BR:
boa00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Bovatus_03112 (yesX_1)
Enzymes [BR:
boa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Bovatus_03112 (yesX_1)
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GFIT
Motif
Pfam:
RGL11_C
FG-GAP_3
FG-GAP
RGI_lyase
Motif
Other DBs
NCBI-ProteinID:
ALJ47720
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All DBs
Position
complement(3861376..3863475)
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AA seq
699 aa
AA seq
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MRKIFILVCGAILLWTSCSDDEVVSSEPVTPEVPVVEYPDITMFDTRGMMVSYDPAHGEL
GALVSWKWMKDDPNDASYDIYRSVNGGEFKKLNSAPISKSTNYKDLSVDVSKTNTYELRF
SGSGEALGSYKFTPEMAATFYKSIHLNMNNLPPLLGATGVPGENEDEDESGSEDVMGYKV
SDAAIGDLDGDGQYEIVVKRQTMSIDNASPGFAPGSALLEAYRLDNGAFMWRVELGPNIR
QGTHYISFIVYDLDGDGKAELAVRTSELTKFGDGTVIGDVDGDGITYYVNTNPESGAYGK
ILDGPEFLSIIDGTTGAELARTDYISRGDKLLWTGYWGDGYNYGNRIDRFLMATGHFDSP
NSAPSIVMCRGYYKNFQIVALDYANGKLTKRWHFDTYPNYQEYVHQGNHNLAVGDVDNDG
KDEIMYGACAIDHDGTGLYSTGRGHGDALHLGKFDPSREGLQVVTCHEGPDMYGDCGTEM
RDAATGEVLVAIPGNGQDVGRCMVADIDPETPGCEIWASEPAGKLYSCKGEVLAKRAPRY
KWGDNWTYNMGIWWSGSLNRQLLDRGFVVDYGTGGEPNVLFSKGDYNVTTGQGTKNNPVF
YADFWGDWREEMVYVTPDYTELRIFTTNLETKYRFRPLMYDHIYRLSAVHENVGYNQPTH
TGFYLGSDLLNGEGMEVGPGNIGDWKPEEGEHNGSAYED
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaatattcattcttgtttgtggagctatacttctctggacttcttgttcggat
gacgaggtggtatcgtcagaaccggtaactcctgaagttccggtagtggaatatcccgat
atcactatgtttgatacccgggggatgatggtgagttatgatcctgctcatggtgaactg
ggagcattggtcagttggaaatggatgaaggacgatccgaatgatgcatcgtatgatatt
tatcggagtgtgaatggaggtgagtttaagaaattgaattctgcgccgatctctaaaagt
acaaattataaggacttatctgtagacgtatcaaagacaaatacctatgaattacgtttt
tccggttccggcgaggctcttggttcttataaattcactcctgaaatggctgcgactttc
tacaaatccattcatctgaatatgaataacttgccgcctcttttgggggcgacaggcgtc
ccgggcgaaaatgaggatgaagatgaaagtggaagtgaagatgttatgggatataaggtt
tctgatgcggcaattggagatttggacggagatgggcaatatgagattgtagtgaaaaga
cagaccatgtcaattgataatgcgagtcccggatttgcaccgggcagtgccttgttggaa
gcttatcggttggataatggtgcgtttatgtggagagtggagctaggtcccaatatccgt
caggggactcattatatttcgtttatagtatatgatttggatggcgacggaaaggctgaa
ttggctgtccgtacatctgaattgacaaaatttggagacgggaccgtgattggcgatgta
gatggtgacgggattacttattatgtaaatactaatccggaaagcggcgcttatggaaag
attttggacggaccggaatttttgtctattattgatggaaccacaggagccgaattggca
cgtacagattatatttcacggggggataaactactttggaccggatattggggagatggg
tataattatggaaaccgtatcgaccgtttcttgatggcaacgggacattttgattctccg
aacagtgcacccagtattgtaatgtgtcgtggatattataaaaatttccagattgtagca
cttgattacgctaatggtaagttgactaaacgttggcatttcgatacttatcccaactat
caggagtatgtacatcagggaaatcataatttggcggttggcgatgtggataatgatggc
aaggacgagattatgtatggagcatgtgccatagaccatgatgggaccggactttattct
acaggacggggacatggtgatgctttacatttgggaaaatttgatcctagccgtgaagga
ttacaagtggtcacttgccatgaaggtcctgatatgtatggtgactgcggtactgaaatg
cgggatgccgctaccggagaagtcttggttgccattccgggtaatggacaggacgtcggc
cgatgtatggtggctgatattgatccggaaacgccgggatgcgaaatttgggcatcagaa
ccagcgggtaagctctattcatgtaaaggggaagtgctggcaaaaagagccccccgttat
aaatggggagataactggacgtataatatgggaatctggtggagcggctctttgaaccgg
cagttgttggatcgtggttttgttgtggattatggaacaggtggagaaccgaatgtcctg
ttctcaaaaggtgattataatgtgaccaccggtcagggaacaaagaataatccggtgttc
tatgcagatttctggggagactggcgtgaagaaatggtttatgtgactccggattatacg
gaactgcgtattttcactaccaaccttgaaactaagtatcgtttccgtcctctgatgtat
gaccacatctatcggctgagtgctgttcacgagaatgtgggatataaccagcctactcat
accggattctaccttggctcagatttgttaaatggtgaaggtatggaagtcggtcccggt
aatatcggtgactggaaaccggaggaaggcgagcataacggctctgcttatgaggattga
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