Bacteroides ovatus: Bovatus_03350
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Entry
Bovatus_03350 CDS
T04113
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
boa
Bacteroides ovatus
Pathway
boa03030
DNA replication
boa03410
Base excision repair
boa03420
Nucleotide excision repair
boa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bovatus_03350 (polA)
03410 Base excision repair
Bovatus_03350 (polA)
03420 Nucleotide excision repair
Bovatus_03350 (polA)
03440 Homologous recombination
Bovatus_03350 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boa03032
]
Bovatus_03350 (polA)
03400 DNA repair and recombination proteins [BR:
boa03400
]
Bovatus_03350 (polA)
Enzymes [BR:
boa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bovatus_03350 (polA)
DNA replication proteins [BR:
boa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Bovatus_03350 (polA)
DNA repair and recombination proteins [BR:
boa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Bovatus_03350 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bovatus_03350 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
ALJ47957
LinkDB
All DBs
Position
complement(4226579..4229461)
Genome browser
AA seq
960 aa
AA seq
DB search
MYFYHEKLIKSMDSGNKLFLLDAYALIYRAYYAFIKNPRINSKGFNTSAILGFVNTLEEV
LKKENPTHIGVAFDPAGPTFRHEAFEQYKAQREETPEAIRLSVPIIKDIIRAYRIPILEV
AGYEADDVIGTLATEAGRQGITTYMMTPDKDYGQLVSDKVFMYRPKHTGGFEVMGVEEVK
AKFDIQSPTQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLVSEFGSIENLLEHTDQLKGAL
KTKVETNREMITFSKFLATIKIDVPIQLEMDALVREEADENSLRSIFEELEFRTLIDRVL
KKDISGNGITSATGSKVATGKSAPSPLPLFPEEGGGMQGDLFANFTPDEPGEAKKSNLET
LESLTYNYQLIDTEEKRRKIIQKLLTSKILSLDTETTGTEPMDAELVGMSFSIAENEAFY
VPVPSDQDKALKIVNEFRPVFENENSLKVGQNIKYDMIVLQNYGATVKGPLFDTMIAHYV
LQPELRHGMDYLAEIYLHYQTIHIDELIGPKGKNQKNMRDLDPKDVYLYACEDADVTLKL
KNVLEKELKENDAERLFYDIEMPLVPVLVNIERNGVLLDTEALKQSSAHFTAQMEQIEKE
IYELAGETFNIASPKQVGEVLFDKLKIVEKAKKTKTGQYVTSEEVLESLRHKHPVVEKIL
EHRGLKKLLGTYIDALPQLINPRTGRVHTSFNQTVTATGRLSSSNPNLQNIPIRDENGKE
IRKAFIPDEGCLFFSADYSQIELRIMAHLSEDKNMIDAFLSNHDIHAATAAKVYKIDLKD
VGSDMRRKAKTANFGIIYGISVFGLAERMNVDRKEAKELIDGYFETYPGVKAYMDKSIQV
AQEKGYVETIFHRKRFLPDINSRNAVVRGYAERNAINAPIQGSAADIIKVAMARIYQRFQ
TEGIQAKMILQVHDELNFSVPVNEKERVEEIVIEEMEKAYRMHVPLKADCGWGKNWLEAH
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
ttgtacttttaccatgaaaaattaattaaatctatggattcaggtaataaattatttctt
ttagacgcttatgcattgatatatcgggcgtattacgcctttattaagaacccaagaatc
aattccaaaggattcaacacttcagccatactgggttttgtgaacaccctcgaagaagta
ttgaaaaaagagaatcccactcatataggagtagccttcgaccccgcaggtcccaccttc
cgccacgaggcttttgaacaatataaagcacaacgcgaagaaactccagaagcaattcgt
ctttccgtacctattataaaggatattatacgcgcctaccgcatccccattctggaagtg
gcaggctacgaagccgatgatgtgataggtacgctcgctaccgaagccggtcgccagggt
atcactacctatatgatgactcccgacaaagattacgggcagctggtaagtgacaaagta
tttatgtatcgccccaaacacacaggaggtttcgaagtgatgggagtggaggaagtgaaa
gccaagtttgacattcagtctccaacacaggtgatcgatatgctcggactgatgggcgac
tcttcagataacattcccggatgtccgggagtaggagaaaagactgctcaaaaactggtc
tccgaattcggaagcatcgagaacctattggaacataccgaccaactgaaaggagcattg
aaaacaaaagtggaaaccaatcgggaaatgattacgttctcgaaatttctcgccaccatt
aaaatcgatgtccctatccaacttgagatggatgctcttgtccgcgaagaagcagacgag
aattcactccgcagcattttcgaggaattggaatttagaacactcatcgaccgggtgctc
aaaaaagatatttccggaaacggaataacctctgccaccggaagcaaagttgctactgga
aaaagtgccccctctcctcttccactttttcccgaagaaggaggcggaatgcaaggcgat
ttatttgcgaatttcacgcccgatgaaccgggtgaagcaaaaaaatcgaacctagagacg
ttagaatcgctcacttacaactatcaactcattgatacagaagagaaaaggcggaaaatt
attcaaaagttacttacatcgaaaattctctcgttagatacggaaaccaccggaaccgaa
ccaatggatgccgaattagtcggaatgagcttttcgattgcagagaatgaagctttttat
gttcccgtaccatcggaccaagacaaagcgttaaaaatcgtaaatgagttccgtccggtc
ttcgaaaatgagaattcgttaaaagtcggacaaaatatcaagtacgacatgattgttctt
caaaattatggcgcaacagtaaaaggtccacttttcgatacgatgatcgctcattatgtt
cttcaaccggaacttcgtcatggcatggattatcttgcggaaatttacctgcactatcag
actatccacattgacgaactgataggtcccaaaggaaagaatcagaagaacatgcgcgat
ctcgacccgaaagatgtatatctatatgcctgcgaagatgcagacgtaactctgaaactg
aaaaatgtattggagaaagaactgaaagaaaatgacgcagaacgtttgttctatgatata
gaaatgccgctagttcccgtattggttaatatagaacggaacggggtattgctggatacg
gaagcattgaagcagtcgtccgcccatttcaccgcccagatggagcaaatcgaaaaagag
atttacgaattggccggtgagactttcaatatcgcttcgcccaaacaagtcggtgaggta
ctgtttgacaaactgaaaatcgtagagaaggcaaaaaagactaagaccggccagtacgtc
acctcagaagaagtgctcgaaagcctccggcacaaacatccggtagtagaaaagattctg
gaacatcgcggactgaaaaagctattgggcacgtatatcgacgcactccctcagcttatc
aatccacgtacaggaagggtgcacacctctttcaaccagactgtaaccgctacgggacgc
cttagttcaagcaatccgaacttacaaaatatccctatccgcgacgagaatggaaaagaa
atccgcaaggctttcatccccgatgaaggctgcctcttcttctctgccgactattcgcaa
attgaattgcgcatcatggcacaccttagcgaggataagaatatgattgatgctttcctt
agcaatcacgatattcatgcggccactgctgccaaagtttataagatcgacctgaaagac
gtaggttccgacatgcgccgtaaagccaagactgccaatttcggtatcatctatggcata
tccgtatttggtcttgccgaacgaatgaatgtagatcgtaaagaagccaaagagttaatc
gacggttactttgaaacttatccgggagtgaaagcatatatggataaaagcattcaggtg
gcccaggaaaaaggctatgtggaaacaatcttccatcggaagcgcttcttaccggacatc
aattcgcggaatgccgttgtacgcggatatgcggaacgaaatgccatcaacgcccctatc
cagggaagtgcggcagatattataaaagtagcaatggcacgtatctatcaacggttccag
accgaaggaatacaagccaaaatgatcctgcaagtacatgacgaattaaatttcagcgtt
cctgtcaatgaaaaagagcgtgtagaagaaatcgtcatcgaagaaatggagaaagcatac
cgcatgcacgtccccttgaaagcagattgcggatggggcaaaaactggcttgaggcacat
taa
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