Bacteroides ovatus: Bovatus_03378
Help
Entry
Bovatus_03378 CDS
T04113
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
boa
Bacteroides ovatus
Pathway
boa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Bovatus_03378 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boa03400
]
Bovatus_03378 (ruvB)
Enzymes [BR:
boa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bovatus_03378 (ruvB)
DNA repair and recombination proteins [BR:
boa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bovatus_03378 (ruvB)
RecFOR pathway proteins
Bovatus_03378 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_22
AAA_16
Mg_chelatase
TIP49
nSTAND3
TsaE
AAA_14
NB-ARC
AAA_18
Rad17
AAA_PrkA
NTPase_1
RNA_helicase
NPHP3_N
AAA_28
AAA_33
ABC_tran
DUF815
AAA_17
bpMoxR
AAA_24
Sigma54_activ_2
NACHT
Motif
Other DBs
NCBI-ProteinID:
ALJ47985
UniProt:
A0A139LN98
LinkDB
All DBs
Position
4264478..4265509
Genome browser
AA seq
343 aa
AA seq
DB search
MEQEDFNIREHQLTSKERDFENALRPLSFEDFSGQDKVVENLRIFVKAARLRGEALDHVL
LHGPPGLGKTTLSNIIANELGVGFKVTSGPVLDKPGDLAGVLTSLEPNDVLFIDEIHRLS
PVVEEYLYSAMEDYRIDIMIDKGPSARSIQIDLNPFTLVGATTRSGLLTAPLRARFGINL
HLEYYDDDILSNIIRRSASILDVPCSVRAASEIASRSRGTPRIANALLRRVRDFAQVKGS
GSIDTEIAQFALEALNIDKYGLDEIDNKILCTIIDKFKGGPVGITTIATALGEDAGTIEE
VYEPFLIKEGFMKRTPRGREVTELAYKHLGRSLYNSQKTLFND
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggaagattttaacatacgcgaacatcagcttacttcaaaagaacgggatttc
gagaatgcactccgtccgttaagctttgaagactttagcgggcaggacaaggtggtggaa
aaccttcgcatttttgtgaaggcggcacgtctgcgtggcgaagcactcgaccatgtgctg
ttgcacggccctcccggattaggaaaaacaactctttcgaatattatcgctaacgaatta
ggagttggctttaaagtaacttccggtccggtacttgataaaccgggtgacctggcaggt
gtattgaccagcctcgaaccgaacgacgtgctttttattgatgaaattcatcggctgtcg
cctgtggtggaggaatatctttattcggcgatggaagattaccgcatcgatattatgatc
gataagggaccttcggcacgcagcatccagatagatttgaatcctttcacgctggttggt
gcaaccacacgtagcggtctgctgacggccccgcttcgtgcacgtttcggtattaatctt
catttggagtactatgatgatgatattttgagcaatatcattcgtcgttctgcgtccata
ctggatgtgccttgttcggtacgtgcagcatcggagatcgcttcccgtagccgcggaacg
ccccgtattgccaatgccttgctccgtcgggtacgtgattttgcgcaggtgaaaggctcc
ggttctatcgatacggagatcgcccagtttgcattggaagcactgaatattgataagtac
ggcctggatgagatagacaacaagatactttgcaccattatagacaaatttaaaggtggt
ccggtaggtatcactaccattgccacggctttgggagaagatgcgggaaccattgaggaa
gtttacgaacctttcctgataaaagaaggatttatgaagcgtactccccgtggacgtgag
gtgaccgaacttgcctataaacatttgggaagaagtctttataacagtcaaaaaacgctg
tttaatgactaa
DBGET
integrated database retrieval system
