Bacteroides ovatus: Bovatus_04055
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Entry
Bovatus_04055 CDS
T04113
Symbol
recQ_3
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
boa
Bacteroides ovatus
Pathway
boa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bovatus_04055 (recQ_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boa03019
]
Bovatus_04055 (recQ_3)
03400 DNA repair and recombination proteins [BR:
boa03400
]
Bovatus_04055 (recQ_3)
Enzymes [BR:
boa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bovatus_04055 (recQ_3)
Messenger RNA biogenesis [BR:
boa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bovatus_04055 (recQ_3)
DNA repair and recombination proteins [BR:
boa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bovatus_04055 (recQ_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
TrmB
ResIII
HTH_9
KGK
UDPGT
Motif
Other DBs
NCBI-ProteinID:
ALJ48650
UniProt:
A0A395VWU6
LinkDB
All DBs
Position
complement(5251772..5253682)
Genome browser
AA seq
636 aa
AA seq
DB search
MNKYQEILKQYWGYDSFRDLQEEIITSIGEGKDTLGLMPTGGGKSITFQVPALAQEGICI
VITPLIALMKDQVQNLRKRGIKALAVYSGMTRQEILTALENCIFGNYKFLYISPERLDTD
IFRTKLRSMKVSMITVDESHCISQWGYDFRPAYLKIAEIRVLLPGIPVLALTATATPEVV
KDIQARLDFREENVFRMSFERKNLAYIVRQTDNKTQELLHILRKIPGSAIIYVRNRRRTK
EITELLVNEDITADFYHAGLDNAVKDLRQKRWQSGEVRVMVATNAFGMGIDKPDVRIVLH
LDLPDSLEAYFQEAGRAGRDGEKAYAVILYTKTDRTTLHRRVVDTFPDKEYILNVYEHLQ
YYYQMAMGDGFQCVREFNLEEFCRKFKYFPVPVDSALKILTQAGYLEYTDEQDNASRILF
TIRRDELYKLREMGTEAEALIQTILRSYTGVFTDYAYISEATLSIRTGLTREQIYNILVT
LTKRRIVDYIPHKKTPYIIYTRERQELRFVHIPPSVYEERKARYEARIKAMEEYVTSENV
CRSRMLLRYFGEKNEHNCGQCDVCLSHRATDALTENSFDFEELKKKISELLTQKPLTPVE
IADKIEAEKESISEVIQYLLEEGEWKMQDGMIHISK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
ttgaataagtatcaggagatattaaaacaatattggggatatgactccttccgcgacttg
caggaggagatcatcaccagtatcggcgaaggcaaagatacactgggacttatgccgacc
ggaggcggtaagtccatcacttttcaagtgcctgctctcgcccaggaagggatttgcatt
gtcattactcctctcatcgccctgatgaaagatcaggtgcaaaacctgcgtaaacgcggc
atcaaggcgcttgctgtctattcgggcatgacgcggcaggagattctcactgctcttgag
aattgcatcttcggtaattataaattcctctatatttctccggaacgtctggacacggac
atattccgtaccaaactgcgatcaatgaaagtctccatgattacggtcgacgaaagtcac
tgtatctcacaatggggatatgacttccgtcctgcttacctgaaaattgccgaaatacgg
gtattgctaccgggaattccggtactggcacttacagccaccgccactccggaagtagtg
aaggatattcaagctcgcttggatttccgtgaagagaatgttttccgcatgagcttcgaa
cggaaaaacctggcgtatatcgtccgacaaacggataacaaaactcaagagctgttgcat
atcttacgaaagatacccggcagtgccattatctatgtccgcaacagacgacgcaccaaa
gaaatcaccgagttactggtaaacgaagatattaccgccgacttctatcacgccggactg
gataatgccgtaaaagacctcagacaaaaacgctggcaaagcggagaagttcgtgtaatg
gtagctacaaacgcctttggaatggggattgataaacccgacgtgcgtatcgtattgcat
ctcgatctccccgactctctcgaagcttacttccaggaggccggtcgtgcaggaagagac
ggtgaaaaagcgtatgctgtgatcttatacaccaaaacggacagaacgacgctacacagg
cgcgttgtggatactttccccgacaaggagtatattctcaatgtctacgaacatctgcag
tattactatcagatggcaatgggcgacggtttccaatgtgtccgcgagtttaatctggaa
gagttttgccggaagttcaaatacttcccggttccggtagacagtgcactgaaaatattg
actcaagccggctatctggaatatacggacgaacaggataatgcctctcgtattcttttc
acgattcgccgggacgaactatacaaattgcgagaaatgggaacggaagccgaagcactg
atacagacgattctccgctcttacaccggagtattcaccgactatgcctatatcagcgaa
gcaaccctgtccatacgtaccggactgacccgcgaacaaatttataatatactggtcacg
cttaccaaacgtcgtatcgtggattacattccgcacaaaaagacaccttatattatatac
acccgcgaacggcaggaacttcgttttgtgcatattcctccttccgtctacgaagaacgc
aaagcccggtatgaagcccgcatcaaagcgatggaagagtatgtcacttcggagaatgtg
tgccggagccggatgctgctccgttacttcggagagaagaacgagcacaactgcggacaa
tgcgatgtttgtcttagtcaccgtgcaaccgatgccctgaccgagaattctttcgatttc
gaggaactgaaaaagaaaatatcagaattactcacccagaaaccgctgacaccagtagaa
atagccgataagatagaagcggaaaaagagagcatcagcgaagtcatccaatatttattg
gaggaaggtgaatggaagatgcaggatggaatgatacatatttcaaaataa
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